Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.45■□□□□ 0.86
Sdc4O35988 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sdc4O35988 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdc4O35988 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Sdc4O35988 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Sdc4O35988 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sdc4O35988 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdc4O35988 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc4O35988 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc4O35988 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.44■□□□□ 0.86
Sdc4O35988 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc4O35988 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc4O35988 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc4O35988 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc4O35988 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc4O35988 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc4O35988 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Sdc4O35988 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.43■□□□□ 0.86
Sdc4O35988 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Sdc4O35988 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Sdc4O35988 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdc4O35988 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.43■□□□□ 0.86
Sdc4O35988 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Sdc4O35988 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdc4O35988 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdc4O35988 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Sdc4O35988 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sdc4O35988 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdc4O35988 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdc4O35988 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdc4O35988 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc4O35988 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.42■□□□□ 0.86
Sdc4O35988 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc4O35988 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc4O35988 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.42■□□□□ 0.86
Sdc4O35988 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.42■□□□□ 0.86
Sdc4O35988 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.42■□□□□ 0.86
Sdc4O35988 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc4O35988 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Sdc4O35988 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Sdc4O35988 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdc4O35988 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Sdc4O35988 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdc4O35988 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sdc4O35988 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sdc4O35988 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdc4O35988 Gm10493-201ENSMUST00000097270 612 ntBASIC20.41■□□□□ 0.86
Sdc4O35988 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Sdc4O35988 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdc4O35988 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc4O35988 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc4O35988 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Sdc4O35988 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Sdc4O35988 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.4■□□□□ 0.86
Sdc4O35988 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc4O35988 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sdc4O35988 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sdc4O35988 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sdc4O35988 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.39■□□□□ 0.85
Sdc4O35988 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdc4O35988 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.39■□□□□ 0.85
Sdc4O35988 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdc4O35988 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdc4O35988 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sdc4O35988 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
Sdc4O35988 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc4O35988 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc4O35988 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Sdc4O35988 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc4O35988 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Sdc4O35988 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc4O35988 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc4O35988 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc4O35988 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc4O35988 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc4O35988 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc4O35988 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc4O35988 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc4O35988 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc4O35988 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc4O35988 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Sdc4O35988 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc4O35988 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc4O35988 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc4O35988 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc4O35988 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.36■□□□□ 0.85
Sdc4O35988 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc4O35988 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc4O35988 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc4O35988 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Sdc4O35988 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc4O35988 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc4O35988 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc4O35988 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc4O35988 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdc4O35988 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.35■□□□□ 0.85
Sdc4O35988 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdc4O35988 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.35■□□□□ 0.85
Sdc4O35988 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.35■□□□□ 0.85
Sdc4O35988 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms