Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx4O35137 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Alx4O35137 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Alx4O35137 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Alx4O35137 Gm13238-201ENSMUST00000117655 780 ntBASIC17.69■□□□□ 0.42
Alx4O35137 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.69■□□□□ 0.42
Alx4O35137 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Alx4O35137 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx4O35137 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx4O35137 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Alx4O35137 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Alx4O35137 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx4O35137 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Alx4O35137 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.68■□□□□ 0.42
Alx4O35137 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx4O35137 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx4O35137 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.68■□□□□ 0.42
Alx4O35137 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.68■□□□□ 0.42
Alx4O35137 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx4O35137 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Alx4O35137 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Alx4O35137 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx4O35137 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Alx4O35137 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Alx4O35137 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx4O35137 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx4O35137 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx4O35137 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx4O35137 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Alx4O35137 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Alx4O35137 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx4O35137 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx4O35137 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Alx4O35137 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx4O35137 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Alx4O35137 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx4O35137 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx4O35137 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx4O35137 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Alx4O35137 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx4O35137 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.65■□□□□ 0.42
Alx4O35137 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx4O35137 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Alx4O35137 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Alx4O35137 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Alx4O35137 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Alx4O35137 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Alx4O35137 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Alx4O35137 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx4O35137 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Alx4O35137 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.64■□□□□ 0.41
Alx4O35137 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.64■□□□□ 0.41
Alx4O35137 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx4O35137 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx4O35137 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Alx4O35137 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.63■□□□□ 0.41
Alx4O35137 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Alx4O35137 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Alx4O35137 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Alx4O35137 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Alx4O35137 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Alx4O35137 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Alx4O35137 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Alx4O35137 Gm10232-201ENSMUST00000089221 720 ntBASIC17.63■□□□□ 0.41
Alx4O35137 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Alx4O35137 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Alx4O35137 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Alx4O35137 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx4O35137 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Alx4O35137 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.62■□□□□ 0.41
Alx4O35137 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Alx4O35137 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx4O35137 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx4O35137 Gm5921-201ENSMUST00000075898 882 ntBASIC17.62■□□□□ 0.41
Alx4O35137 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx4O35137 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Alx4O35137 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx4O35137 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.61■□□□□ 0.41
Alx4O35137 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.61■□□□□ 0.41
Alx4O35137 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx4O35137 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx4O35137 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Alx4O35137 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx4O35137 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.6■□□□□ 0.41
Alx4O35137 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx4O35137 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx4O35137 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx4O35137 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Alx4O35137 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Alx4O35137 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Alx4O35137 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Alx4O35137 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx4O35137 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.6■□□□□ 0.41
Alx4O35137 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx4O35137 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Alx4O35137 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx4O35137 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx4O35137 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx4O35137 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx4O35137 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms