Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.23■□□□□ 0.83
Trove2O08848 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trove2O08848 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.23■□□□□ 0.83
Trove2O08848 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trove2O08848 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trove2O08848 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.23■□□□□ 0.83
Trove2O08848 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trove2O08848 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trove2O08848 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trove2O08848 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.22■□□□□ 0.83
Trove2O08848 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trove2O08848 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trove2O08848 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.22■□□□□ 0.83
Trove2O08848 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trove2O08848 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Trove2O08848 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trove2O08848 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trove2O08848 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trove2O08848 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trove2O08848 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trove2O08848 Gm10232-201ENSMUST00000089221 720 ntBASIC20.21■□□□□ 0.83
Trove2O08848 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trove2O08848 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trove2O08848 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.2■□□□□ 0.83
Trove2O08848 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trove2O08848 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.2■□□□□ 0.82
Trove2O08848 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trove2O08848 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trove2O08848 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trove2O08848 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Trove2O08848 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.2■□□□□ 0.82
Trove2O08848 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trove2O08848 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trove2O08848 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trove2O08848 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trove2O08848 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trove2O08848 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trove2O08848 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Trove2O08848 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.19■□□□□ 0.82
Trove2O08848 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trove2O08848 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trove2O08848 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trove2O08848 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trove2O08848 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trove2O08848 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trove2O08848 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trove2O08848 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trove2O08848 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trove2O08848 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trove2O08848 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trove2O08848 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.18■□□□□ 0.82
Trove2O08848 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trove2O08848 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trove2O08848 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trove2O08848 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trove2O08848 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.17■□□□□ 0.82
Trove2O08848 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trove2O08848 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trove2O08848 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trove2O08848 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trove2O08848 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trove2O08848 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.17■□□□□ 0.82
Trove2O08848 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trove2O08848 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Trove2O08848 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trove2O08848 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Trove2O08848 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.16■□□□□ 0.82
Trove2O08848 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trove2O08848 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Trove2O08848 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.16■□□□□ 0.82
Trove2O08848 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.16■□□□□ 0.82
Trove2O08848 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trove2O08848 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trove2O08848 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trove2O08848 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trove2O08848 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.16■□□□□ 0.82
Trove2O08848 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trove2O08848 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trove2O08848 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trove2O08848 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.15■□□□□ 0.82
Trove2O08848 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trove2O08848 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trove2O08848 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trove2O08848 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trove2O08848 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trove2O08848 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trove2O08848 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trove2O08848 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trove2O08848 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trove2O08848 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trove2O08848 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trove2O08848 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trove2O08848 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trove2O08848 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trove2O08848 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trove2O08848 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trove2O08848 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.13■□□□□ 0.81
Trove2O08848 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.13■□□□□ 0.81
Trove2O08848 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trove2O08848 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms