Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Gm9959-201ENSMUST00000068277 390 ntBASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfrsf11bO08712 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.15■□□□□ 0.82
Tnfrsf11bO08712 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf11bO08712 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf11bO08712 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf11bO08712 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Tnfrsf11bO08712 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.15■□□□□ 0.82
Tnfrsf11bO08712 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf11bO08712 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf11bO08712 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf11bO08712 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf11bO08712 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf11bO08712 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tnfrsf11bO08712 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tnfrsf11bO08712 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Tnfrsf11bO08712 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf11bO08712 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf11bO08712 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf11bO08712 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf11bO08712 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf11bO08712 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.14■□□□□ 0.81
Tnfrsf11bO08712 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf11bO08712 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf11bO08712 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf11bO08712 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf11bO08712 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.13■□□□□ 0.81
Tnfrsf11bO08712 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Tnfrsf11bO08712 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf11bO08712 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf11bO08712 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Tnfrsf11bO08712 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf11bO08712 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf11bO08712 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.12■□□□□ 0.81
Tnfrsf11bO08712 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf11bO08712 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.12■□□□□ 0.81
Tnfrsf11bO08712 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
Tnfrsf11bO08712 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Tnfrsf11bO08712 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf11bO08712 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf11bO08712 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Tnfrsf11bO08712 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Tnfrsf11bO08712 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Tnfrsf11bO08712 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.11■□□□□ 0.81
Tnfrsf11bO08712 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf11bO08712 Gm22238-201ENSMUST00000175222 88 ntBASIC20.11■□□□□ 0.81
Tnfrsf11bO08712 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
Tnfrsf11bO08712 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf11bO08712 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Tnfrsf11bO08712 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf11bO08712 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Tnfrsf11bO08712 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.11■□□□□ 0.81
Tnfrsf11bO08712 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11bO08712 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11bO08712 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11bO08712 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11bO08712 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.1■□□□□ 0.81
Tnfrsf11bO08712 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.1■□□□□ 0.81
Tnfrsf11bO08712 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11bO08712 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11bO08712 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11bO08712 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11bO08712 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf11bO08712 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf11bO08712 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf11bO08712 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.09■□□□□ 0.81
Tnfrsf11bO08712 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf11bO08712 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Tnfrsf11bO08712 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Tnfrsf11bO08712 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf11bO08712 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf11bO08712 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfrsf11bO08712 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfrsf11bO08712 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfrsf11bO08712 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfrsf11bO08712 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Tnfrsf11bO08712 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.08■□□□□ 0.81
Tnfrsf11bO08712 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.08■□□□□ 0.81
Tnfrsf11bO08712 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfrsf11bO08712 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tnfrsf11bO08712 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tnfrsf11bO08712 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfrsf11bO08712 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.07■□□□□ 0.8
Tnfrsf11bO08712 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms