Protein–RNA interactions for Protein: O08576

Rundc3a, RUN domain-containing protein 3A, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3aO08576 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rundc3aO08576 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3aO08576 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3aO08576 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.3■□□□□ 0.68
Rundc3aO08576 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3aO08576 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.3■□□□□ 0.68
Rundc3aO08576 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.3■□□□□ 0.68
Rundc3aO08576 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3aO08576 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3aO08576 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3aO08576 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.3■□□□□ 0.68
Rundc3aO08576 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3aO08576 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rundc3aO08576 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rundc3aO08576 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rundc3aO08576 Gm43530-201ENSMUST00000195920 274 ntBASIC19.29■□□□□ 0.68
Rundc3aO08576 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.29■□□□□ 0.68
Rundc3aO08576 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rundc3aO08576 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rundc3aO08576 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rundc3aO08576 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rundc3aO08576 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rundc3aO08576 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.28■□□□□ 0.68
Rundc3aO08576 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rundc3aO08576 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rundc3aO08576 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rundc3aO08576 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rundc3aO08576 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.28■□□□□ 0.68
Rundc3aO08576 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rundc3aO08576 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rundc3aO08576 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rundc3aO08576 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rundc3aO08576 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rundc3aO08576 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rundc3aO08576 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rundc3aO08576 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rundc3aO08576 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rundc3aO08576 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.27■□□□□ 0.68
Rundc3aO08576 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rundc3aO08576 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rundc3aO08576 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rundc3aO08576 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rundc3aO08576 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.26■□□□□ 0.67
Rundc3aO08576 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.26■□□□□ 0.67
Rundc3aO08576 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.26■□□□□ 0.67
Rundc3aO08576 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rundc3aO08576 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rundc3aO08576 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rundc3aO08576 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rundc3aO08576 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rundc3aO08576 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rundc3aO08576 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rundc3aO08576 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rundc3aO08576 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rundc3aO08576 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.24■□□□□ 0.67
Rundc3aO08576 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.24■□□□□ 0.67
Rundc3aO08576 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rundc3aO08576 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rundc3aO08576 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rundc3aO08576 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rundc3aO08576 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rundc3aO08576 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rundc3aO08576 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rundc3aO08576 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rundc3aO08576 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rundc3aO08576 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rundc3aO08576 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rundc3aO08576 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rundc3aO08576 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rundc3aO08576 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rundc3aO08576 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rundc3aO08576 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rundc3aO08576 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rundc3aO08576 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rundc3aO08576 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rundc3aO08576 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.22■□□□□ 0.67
Rundc3aO08576 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rundc3aO08576 Gm15820-201ENSMUST00000201566 728 ntBASIC19.22■□□□□ 0.67
Rundc3aO08576 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Rundc3aO08576 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.22■□□□□ 0.67
Rundc3aO08576 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rundc3aO08576 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3aO08576 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rundc3aO08576 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3aO08576 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3aO08576 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3aO08576 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3aO08576 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.21■□□□□ 0.67
Rundc3aO08576 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3aO08576 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3aO08576 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3aO08576 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3aO08576 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3aO08576 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.2■□□□□ 0.66
Rundc3aO08576 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rundc3aO08576 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3aO08576 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3aO08576 Gm7417-201ENSMUST00000192950 473 ntBASIC19.2■□□□□ 0.66
Rundc3aO08576 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3aO08576 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms