Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm10553J3QPF1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm10553J3QPF1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm10553J3QPF1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm10553J3QPF1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Gm10553J3QPF1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.14■□□□□ 0.01
Gm10553J3QPF1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm10553J3QPF1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Gm10553J3QPF1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm10553J3QPF1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm10553J3QPF1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm10553J3QPF1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm10553J3QPF1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm10553J3QPF1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.13■□□□□ 0.01
Gm10553J3QPF1 Gm15039-201ENSMUST00000118914 875 ntBASIC15.13■□□□□ 0.01
Gm10553J3QPF1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Gm10553J3QPF1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Gm10553J3QPF1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm10553J3QPF1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm10553J3QPF1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm10553J3QPF1 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.13■□□□□ 0.01
Gm10553J3QPF1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm10553J3QPF1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm10553J3QPF1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Gm12251-201ENSMUST00000117893 792 ntBASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.12■□□□□ 0.01
Gm10553J3QPF1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Gm8493-201ENSMUST00000196881 489 ntBASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Gm6139-201ENSMUST00000079261 882 ntBASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm10553J3QPF1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Gm10553J3QPF1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm10553J3QPF1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
Gm10553J3QPF1 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.11■□□□□ 0.01
Gm10553J3QPF1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Gm10553J3QPF1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm10553J3QPF1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm10553J3QPF1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm10553J3QPF1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.11■□□□□ 0.01
Gm10553J3QPF1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Gm10553J3QPF1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm10553J3QPF1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm10553J3QPF1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm10553J3QPF1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm10553J3QPF1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm10553J3QPF1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm10553J3QPF1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm10553J3QPF1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm10553J3QPF1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm10553J3QPF1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm10553J3QPF1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Gm10553J3QPF1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm10553J3QPF1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm10553J3QPF1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm10553J3QPF1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm10553J3QPF1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Gm10553J3QPF1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.1■□□□□ 0.01
Gm10553J3QPF1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm10553J3QPF1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm10553J3QPF1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm10553J3QPF1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm10553J3QPF1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.09■□□□□ 0.01
Gm10553J3QPF1 Spcs1-204ENSMUST00000226782 949 ntBASIC15.09■□□□□ 0.01
Gm10553J3QPF1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm10553J3QPF1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm10553J3QPF1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm10553J3QPF1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm10553J3QPF1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm10553J3QPF1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm10553J3QPF1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm10553J3QPF1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.08■□□□□ 0.01
Gm10553J3QPF1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm10553J3QPF1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Gm10553J3QPF1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm10553J3QPF1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm10553J3QPF1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm10553J3QPF1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Gm10553J3QPF1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm10553J3QPF1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.08■□□□□ 0
Gm10553J3QPF1 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.08■□□□□ 0
Gm10553J3QPF1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.08■□□□□ 0
Gm10553J3QPF1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm10553J3QPF1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm10553J3QPF1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10553J3QPF1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms