Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.71■□□□□ 0.27
Gm20708H3BKF4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm20708H3BKF4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm20708H3BKF4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm20708H3BKF4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm20708H3BKF4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm20708H3BKF4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Gm20708H3BKF4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm20708H3BKF4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm20708H3BKF4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm20708H3BKF4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.7■□□□□ 0.26
Gm20708H3BKF4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm20708H3BKF4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm20708H3BKF4 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.69■□□□□ 0.26
Gm20708H3BKF4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm20708H3BKF4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm20708H3BKF4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gm20708H3BKF4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm20708H3BKF4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm20708H3BKF4 Gm12251-201ENSMUST00000117893 792 ntBASIC16.69■□□□□ 0.26
Gm20708H3BKF4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.69■□□□□ 0.26
Gm20708H3BKF4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm20708H3BKF4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm20708H3BKF4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm20708H3BKF4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gm20708H3BKF4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm20708H3BKF4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Gm27454-201ENSMUST00000185090 204 ntBASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Gm20708H3BKF4 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.67■□□□□ 0.26
Gm20708H3BKF4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm20708H3BKF4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Gm20708H3BKF4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Gm20708H3BKF4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm20708H3BKF4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Gm20708H3BKF4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm20708H3BKF4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm20708H3BKF4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm20708H3BKF4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
Gm20708H3BKF4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm20708H3BKF4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Gm20708H3BKF4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Gm20708H3BKF4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Gm20708H3BKF4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm20708H3BKF4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm20708H3BKF4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm20708H3BKF4 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.66■□□□□ 0.26
Gm20708H3BKF4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm20708H3BKF4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Gm20708H3BKF4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm20708H3BKF4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm20708H3BKF4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm20708H3BKF4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm20708H3BKF4 Notumos-201ENSMUST00000151998 2659 ntBASIC16.65■□□□□ 0.26
Gm20708H3BKF4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm20708H3BKF4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm20708H3BKF4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm20708H3BKF4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm20708H3BKF4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm20708H3BKF4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
Gm20708H3BKF4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm20708H3BKF4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Gm20708H3BKF4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm20708H3BKF4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm20708H3BKF4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm20708H3BKF4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm20708H3BKF4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm20708H3BKF4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm20708H3BKF4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm20708H3BKF4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm20708H3BKF4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm20708H3BKF4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm20708H3BKF4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm20708H3BKF4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Gm20708H3BKF4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Gm20708H3BKF4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm20708H3BKF4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Gm20708H3BKF4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm20708H3BKF4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm20708H3BKF4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm20708H3BKF4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm20708H3BKF4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.63■□□□□ 0.25
Gm20708H3BKF4 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.63■□□□□ 0.25
Gm20708H3BKF4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Gm20708H3BKF4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm20708H3BKF4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms