Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.35■□□□□ 0.85
Pcdh9F8VPK8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh9F8VPK8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh9F8VPK8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdh9F8VPK8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Pcdh9F8VPK8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh9F8VPK8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh9F8VPK8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdh9F8VPK8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Pcdh9F8VPK8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdh9F8VPK8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh9F8VPK8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdh9F8VPK8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
Pcdh9F8VPK8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh9F8VPK8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh9F8VPK8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh9F8VPK8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh9F8VPK8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Pcdh9F8VPK8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Pcdh9F8VPK8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh9F8VPK8 Rps24-207ENSMUST00000224568 714 ntBASIC20.33■□□□□ 0.85
Pcdh9F8VPK8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh9F8VPK8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh9F8VPK8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh9F8VPK8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.33■□□□□ 0.84
Pcdh9F8VPK8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh9F8VPK8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh9F8VPK8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh9F8VPK8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.32■□□□□ 0.84
Pcdh9F8VPK8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.32■□□□□ 0.84
Pcdh9F8VPK8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh9F8VPK8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdh9F8VPK8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pcdh9F8VPK8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdh9F8VPK8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh9F8VPK8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh9F8VPK8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh9F8VPK8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh9F8VPK8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh9F8VPK8 Gm45102-201ENSMUST00000207427 857 ntBASIC20.31■□□□□ 0.84
Pcdh9F8VPK8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.31■□□□□ 0.84
Pcdh9F8VPK8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh9F8VPK8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh9F8VPK8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh9F8VPK8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Pcdh9F8VPK8 Gm14117-201ENSMUST00000122417 843 ntBASIC20.3■□□□□ 0.84
Pcdh9F8VPK8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.3■□□□□ 0.84
Pcdh9F8VPK8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh9F8VPK8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcdh9F8VPK8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh9F8VPK8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh9F8VPK8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdh9F8VPK8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh9F8VPK8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh9F8VPK8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdh9F8VPK8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh9F8VPK8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Pcdh9F8VPK8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.29■□□□□ 0.84
Pcdh9F8VPK8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Pcdh9F8VPK8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdh9F8VPK8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pcdh9F8VPK8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh9F8VPK8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh9F8VPK8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh9F8VPK8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh9F8VPK8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh9F8VPK8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh9F8VPK8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh9F8VPK8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.28■□□□□ 0.84
Pcdh9F8VPK8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh9F8VPK8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh9F8VPK8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh9F8VPK8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdh9F8VPK8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh9F8VPK8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh9F8VPK8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdh9F8VPK8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.27■□□□□ 0.84
Pcdh9F8VPK8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh9F8VPK8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.27■□□□□ 0.83
Pcdh9F8VPK8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh9F8VPK8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh9F8VPK8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdh9F8VPK8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh9F8VPK8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh9F8VPK8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh9F8VPK8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh9F8VPK8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.26■□□□□ 0.83
Pcdh9F8VPK8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh9F8VPK8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.26■□□□□ 0.83
Pcdh9F8VPK8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh9F8VPK8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh9F8VPK8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh9F8VPK8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh9F8VPK8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh9F8VPK8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh9F8VPK8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcdh9F8VPK8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh9F8VPK8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh9F8VPK8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh9F8VPK8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms