Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shank1D3YZU1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shank1D3YZU1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shank1D3YZU1 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.8■□□□□ 0.44
Shank1D3YZU1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shank1D3YZU1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shank1D3YZU1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shank1D3YZU1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank1D3YZU1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.79■□□□□ 0.44
Shank1D3YZU1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.79■□□□□ 0.44
Shank1D3YZU1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank1D3YZU1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank1D3YZU1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank1D3YZU1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank1D3YZU1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shank1D3YZU1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank1D3YZU1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank1D3YZU1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank1D3YZU1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank1D3YZU1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.78■□□□□ 0.44
Shank1D3YZU1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.78■□□□□ 0.44
Shank1D3YZU1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shank1D3YZU1 Mir7071-201ENSMUST00000184847 69 ntBASIC17.78■□□□□ 0.44
Shank1D3YZU1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank1D3YZU1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank1D3YZU1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank1D3YZU1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank1D3YZU1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shank1D3YZU1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank1D3YZU1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shank1D3YZU1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.77■□□□□ 0.44
Shank1D3YZU1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Shank1D3YZU1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Shank1D3YZU1 Gm22240-201ENSMUST00000175225 82 ntBASIC17.77■□□□□ 0.44
Shank1D3YZU1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.77■□□□□ 0.44
Shank1D3YZU1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shank1D3YZU1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shank1D3YZU1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shank1D3YZU1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Shank1D3YZU1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shank1D3YZU1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shank1D3YZU1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shank1D3YZU1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Shank1D3YZU1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Shank1D3YZU1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank1D3YZU1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Shank1D3YZU1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.76■□□□□ 0.43
Shank1D3YZU1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank1D3YZU1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank1D3YZU1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shank1D3YZU1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank1D3YZU1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.75■□□□□ 0.43
Shank1D3YZU1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shank1D3YZU1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Shank1D3YZU1 Gm20760-201ENSMUST00000179197 648 ntBASIC17.75■□□□□ 0.43
Shank1D3YZU1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shank1D3YZU1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Shank1D3YZU1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Shank1D3YZU1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shank1D3YZU1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.74■□□□□ 0.43
Shank1D3YZU1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shank1D3YZU1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Shank1D3YZU1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shank1D3YZU1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shank1D3YZU1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shank1D3YZU1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Shank1D3YZU1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Shank1D3YZU1 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.74■□□□□ 0.43
Shank1D3YZU1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.74■□□□□ 0.43
Shank1D3YZU1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank1D3YZU1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.73■□□□□ 0.43
Shank1D3YZU1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shank1D3YZU1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.73■□□□□ 0.43
Shank1D3YZU1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank1D3YZU1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank1D3YZU1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank1D3YZU1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank1D3YZU1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank1D3YZU1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank1D3YZU1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shank1D3YZU1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shank1D3YZU1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shank1D3YZU1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Shank1D3YZU1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shank1D3YZU1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shank1D3YZU1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Shank1D3YZU1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank1D3YZU1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.71■□□□□ 0.43
Shank1D3YZU1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Shank1D3YZU1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Shank1D3YZU1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank1D3YZU1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank1D3YZU1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Shank1D3YZU1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.7■□□□□ 0.42
Shank1D3YZU1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Shank1D3YZU1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.7■□□□□ 0.42
Shank1D3YZU1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank1D3YZU1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shank1D3YZU1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shank1D3YZU1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms