Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rrn3B2RS91 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rrn3B2RS91 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rrn3B2RS91 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rrn3B2RS91 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rrn3B2RS91 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rrn3B2RS91 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.86■□□□□ 0.77
Rrn3B2RS91 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rrn3B2RS91 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rrn3B2RS91 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.86■□□□□ 0.77
Rrn3B2RS91 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.86■□□□□ 0.77
Rrn3B2RS91 Mir7075-201ENSMUST00000184187 82 ntBASIC19.86■□□□□ 0.77
Rrn3B2RS91 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.86■□□□□ 0.77
Rrn3B2RS91 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rrn3B2RS91 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rrn3B2RS91 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rrn3B2RS91 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.86■□□□□ 0.77
Rrn3B2RS91 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.85■□□□□ 0.77
Rrn3B2RS91 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rrn3B2RS91 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rrn3B2RS91 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Rrn3B2RS91 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rrn3B2RS91 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rrn3B2RS91 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rrn3B2RS91 Iqck-206ENSMUST00000208658 2891 ntBASIC19.85■□□□□ 0.77
Rrn3B2RS91 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.85■□□□□ 0.77
Rrn3B2RS91 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrn3B2RS91 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrn3B2RS91 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rrn3B2RS91 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrn3B2RS91 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.84■□□□□ 0.77
Rrn3B2RS91 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrn3B2RS91 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.84■□□□□ 0.77
Rrn3B2RS91 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrn3B2RS91 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.84■□□□□ 0.77
Rrn3B2RS91 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrn3B2RS91 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrn3B2RS91 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrn3B2RS91 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rrn3B2RS91 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rrn3B2RS91 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rrn3B2RS91 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rrn3B2RS91 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rrn3B2RS91 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rrn3B2RS91 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rrn3B2RS91 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rrn3B2RS91 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rrn3B2RS91 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rrn3B2RS91 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rrn3B2RS91 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rrn3B2RS91 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rrn3B2RS91 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rrn3B2RS91 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rrn3B2RS91 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.82■□□□□ 0.76
Rrn3B2RS91 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rrn3B2RS91 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.82■□□□□ 0.76
Rrn3B2RS91 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rrn3B2RS91 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rrn3B2RS91 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rrn3B2RS91 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrn3B2RS91 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrn3B2RS91 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrn3B2RS91 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrn3B2RS91 Gm8493-201ENSMUST00000196881 489 ntBASIC19.81■□□□□ 0.76
Rrn3B2RS91 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrn3B2RS91 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrn3B2RS91 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.8■□□□□ 0.76
Rrn3B2RS91 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrn3B2RS91 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rrn3B2RS91 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rrn3B2RS91 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrn3B2RS91 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrn3B2RS91 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rrn3B2RS91 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrn3B2RS91 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rrn3B2RS91 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rrn3B2RS91 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rrn3B2RS91 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.79■□□□□ 0.76
Rrn3B2RS91 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rrn3B2RS91 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rrn3B2RS91 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Rrn3B2RS91 Spcs1-204ENSMUST00000226782 949 ntBASIC19.79■□□□□ 0.76
Rrn3B2RS91 Gm6139-201ENSMUST00000079261 882 ntBASIC19.79■□□□□ 0.76
Rrn3B2RS91 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rrn3B2RS91 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rrn3B2RS91 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rrn3B2RS91 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rrn3B2RS91 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rrn3B2RS91 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rrn3B2RS91 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rrn3B2RS91 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rrn3B2RS91 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rrn3B2RS91 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rrn3B2RS91 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rrn3B2RS91 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Rrn3B2RS91 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rrn3B2RS91 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rrn3B2RS91 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rrn3B2RS91 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rrn3B2RS91 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms