Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a4A2AX52 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Col6a4A2AX52 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a4A2AX52 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a4A2AX52 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a4A2AX52 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a4A2AX52 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a4A2AX52 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.73■□□□□ 0.27
Col6a4A2AX52 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a4A2AX52 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a4A2AX52 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a4A2AX52 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.73■□□□□ 0.27
Col6a4A2AX52 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Col6a4A2AX52 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a4A2AX52 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a4A2AX52 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a4A2AX52 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a4A2AX52 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a4A2AX52 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a4A2AX52 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a4A2AX52 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a4A2AX52 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.72■□□□□ 0.27
Col6a4A2AX52 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a4A2AX52 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a4A2AX52 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.72■□□□□ 0.27
Col6a4A2AX52 Gm6365-201ENSMUST00000054711 744 ntBASIC16.72■□□□□ 0.27
Col6a4A2AX52 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a4A2AX52 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Col6a4A2AX52 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a4A2AX52 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.72■□□□□ 0.27
Col6a4A2AX52 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.71■□□□□ 0.27
Col6a4A2AX52 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a4A2AX52 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Col6a4A2AX52 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.71■□□□□ 0.27
Col6a4A2AX52 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a4A2AX52 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a4A2AX52 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a4A2AX52 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a4A2AX52 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.71■□□□□ 0.26
Col6a4A2AX52 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.7■□□□□ 0.26
Col6a4A2AX52 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a4A2AX52 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a4A2AX52 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Col6a4A2AX52 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a4A2AX52 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a4A2AX52 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a4A2AX52 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.7■□□□□ 0.26
Col6a4A2AX52 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a4A2AX52 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a4A2AX52 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Col6a4A2AX52 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a4A2AX52 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a4A2AX52 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a4A2AX52 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a4A2AX52 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a4A2AX52 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a4A2AX52 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Col6a4A2AX52 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Col6a4A2AX52 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a4A2AX52 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Col6a4A2AX52 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.69■□□□□ 0.26
Col6a4A2AX52 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.69■□□□□ 0.26
Col6a4A2AX52 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Col6a4A2AX52 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a4A2AX52 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a4A2AX52 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a4A2AX52 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a4A2AX52 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a4A2AX52 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a4A2AX52 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.67■□□□□ 0.26
Col6a4A2AX52 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a4A2AX52 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a4A2AX52 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a4A2AX52 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a4A2AX52 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.67■□□□□ 0.26
Col6a4A2AX52 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.67■□□□□ 0.26
Col6a4A2AX52 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col6a4A2AX52 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a4A2AX52 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a4A2AX52 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a4A2AX52 Gm20760-201ENSMUST00000179197 648 ntBASIC16.66■□□□□ 0.26
Col6a4A2AX52 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a4A2AX52 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a4A2AX52 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a4A2AX52 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Col6a4A2AX52 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms