Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav12-1A0N8R1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav12-1A0N8R1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12-1A0N8R1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12-1A0N8R1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12-1A0N8R1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12-1A0N8R1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav12-1A0N8R1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12-1A0N8R1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav12-1A0N8R1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12-1A0N8R1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12-1A0N8R1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12-1A0N8R1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav12-1A0N8R1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12-1A0N8R1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav12-1A0N8R1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12-1A0N8R1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav12-1A0N8R1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12-1A0N8R1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12-1A0N8R1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.54■□□□□ 0.24
Trav12-1A0N8R1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12-1A0N8R1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12-1A0N8R1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12-1A0N8R1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.53■□□□□ 0.24
Trav12-1A0N8R1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav12-1A0N8R1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12-1A0N8R1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12-1A0N8R1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12-1A0N8R1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.53■□□□□ 0.24
Trav12-1A0N8R1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav12-1A0N8R1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12-1A0N8R1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12-1A0N8R1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12-1A0N8R1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12-1A0N8R1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12-1A0N8R1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12-1A0N8R1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12-1A0N8R1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12-1A0N8R1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav12-1A0N8R1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav12-1A0N8R1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav12-1A0N8R1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Trav12-1A0N8R1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12-1A0N8R1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav12-1A0N8R1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12-1A0N8R1 Gm43530-201ENSMUST00000195920 274 ntBASIC16.51■□□□□ 0.23
Trav12-1A0N8R1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.51■□□□□ 0.23
Trav12-1A0N8R1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12-1A0N8R1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav12-1A0N8R1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav12-1A0N8R1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12-1A0N8R1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12-1A0N8R1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12-1A0N8R1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12-1A0N8R1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12-1A0N8R1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12-1A0N8R1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12-1A0N8R1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav12-1A0N8R1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12-1A0N8R1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12-1A0N8R1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12-1A0N8R1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12-1A0N8R1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12-1A0N8R1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12-1A0N8R1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12-1A0N8R1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12-1A0N8R1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav12-1A0N8R1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12-1A0N8R1 Gm9870-201ENSMUST00000063874 645 ntBASIC16.48■□□□□ 0.23
Trav12-1A0N8R1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav12-1A0N8R1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms