Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-5A0A140T8M6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-5A0A140T8M6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-5A0A140T8M6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Igkv3-5A0A140T8M6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-5A0A140T8M6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Igkv3-5A0A140T8M6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-5A0A140T8M6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Igkv3-5A0A140T8M6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-5A0A140T8M6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC12.51□□□□□ -0.41
Igkv3-5A0A140T8M6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-5A0A140T8M6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-5A0A140T8M6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Igkv3-5A0A140T8M6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Igkv3-5A0A140T8M6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC12.5□□□□□ -0.41
Igkv3-5A0A140T8M6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC12.5□□□□□ -0.41
Igkv3-5A0A140T8M6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Igkv3-5A0A140T8M6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-5A0A140T8M6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-5A0A140T8M6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-5A0A140T8M6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-5A0A140T8M6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-5A0A140T8M6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-5A0A140T8M6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-5A0A140T8M6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Igkv3-5A0A140T8M6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Igkv3-5A0A140T8M6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv3-5A0A140T8M6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv3-5A0A140T8M6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv3-5A0A140T8M6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv3-5A0A140T8M6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv3-5A0A140T8M6 Gm16464-201ENSMUST00000117815 1095 ntBASIC12.49□□□□□ -0.41
Igkv3-5A0A140T8M6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv3-5A0A140T8M6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv3-5A0A140T8M6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv3-5A0A140T8M6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Igkv3-5A0A140T8M6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv3-5A0A140T8M6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv3-5A0A140T8M6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Igkv3-5A0A140T8M6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv3-5A0A140T8M6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv3-5A0A140T8M6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv3-5A0A140T8M6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv3-5A0A140T8M6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv3-5A0A140T8M6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv3-5A0A140T8M6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv3-5A0A140T8M6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv3-5A0A140T8M6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv3-5A0A140T8M6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv3-5A0A140T8M6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC12.46□□□□□ -0.41
Igkv3-5A0A140T8M6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv3-5A0A140T8M6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv3-5A0A140T8M6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC12.46□□□□□ -0.41
Igkv3-5A0A140T8M6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv3-5A0A140T8M6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Igkv3-5A0A140T8M6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Igkv3-5A0A140T8M6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Igkv3-5A0A140T8M6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Igkv3-5A0A140T8M6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Igkv3-5A0A140T8M6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Igkv3-5A0A140T8M6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-5A0A140T8M6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-5A0A140T8M6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-5A0A140T8M6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-5A0A140T8M6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-5A0A140T8M6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-5A0A140T8M6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Igkv3-5A0A140T8M6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-5A0A140T8M6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-5A0A140T8M6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-5A0A140T8M6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-5A0A140T8M6 Gm4430-201ENSMUST00000192413 1943 ntBASIC12.45□□□□□ -0.42
Igkv3-5A0A140T8M6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-5A0A140T8M6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Igkv3-5A0A140T8M6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Igkv3-5A0A140T8M6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-5A0A140T8M6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC12.44□□□□□ -0.42
Igkv3-5A0A140T8M6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Igkv3-5A0A140T8M6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-5A0A140T8M6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-5A0A140T8M6 Gm5921-201ENSMUST00000075898 882 ntBASIC12.44□□□□□ -0.42
Igkv3-5A0A140T8M6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Igkv3-5A0A140T8M6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms