Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.54■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.54■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Gm27405-201ENSMUST00000184201 112 ntBASIC16.52■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Gm42569-201ENSMUST00000200539 472 ntBASIC16.52■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rpl13a-ps1A0A140T8K2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Gm29257-201ENSMUST00000186115 639 ntBASIC16.5■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.5■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.5■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.5■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Smad6-203ENSMUST00000179458 273 ntBASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Gm42642-201ENSMUST00000200683 355 ntBASIC16.48■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Gm40848-201ENSMUST00000221998 324 ntBASIC16.48■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rpl13a-ps1A0A140T8K2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms