Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC42.67■■■■■ 4.42
Gm35339A0A140LHH9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC42.66■■■■■ 4.42
Gm35339A0A140LHH9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC42.66■■■■■ 4.42
Gm35339A0A140LHH9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC42.66■■■■■ 4.42
Gm35339A0A140LHH9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC42.66■■■■■ 4.42
Gm35339A0A140LHH9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC42.66■■■■■ 4.42
Gm35339A0A140LHH9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC42.66■■■■■ 4.42
Gm35339A0A140LHH9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC42.65■■■■■ 4.42
Gm35339A0A140LHH9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC42.65■■■■■ 4.42
Gm35339A0A140LHH9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC42.64■■■■■ 4.42
Gm35339A0A140LHH9 Gm38205-201ENSMUST00000192243 258 ntBASIC42.63■■■■■ 4.41
Gm35339A0A140LHH9 Gm3807-201ENSMUST00000193520 1168 ntBASIC42.63■■■■■ 4.41
Gm35339A0A140LHH9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC42.63■■■■■ 4.41
Gm35339A0A140LHH9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC42.63■■■■■ 4.41
Gm35339A0A140LHH9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC42.63■■■■■ 4.41
Gm35339A0A140LHH9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC42.62■■■■■ 4.41
Gm35339A0A140LHH9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC42.61■■■■■ 4.41
Gm35339A0A140LHH9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC42.6■■■■■ 4.41
Gm35339A0A140LHH9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC42.6■■■■■ 4.41
Gm35339A0A140LHH9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC42.6■■■■■ 4.41
Gm35339A0A140LHH9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC42.59■■■■■ 4.41
Gm35339A0A140LHH9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC42.59■■■■■ 4.41
Gm35339A0A140LHH9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC42.59■■■■■ 4.41
Gm35339A0A140LHH9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC42.59■■■■■ 4.41
Gm35339A0A140LHH9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC42.58■■■■■ 4.41
Gm35339A0A140LHH9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC42.58■■■■■ 4.41
Gm35339A0A140LHH9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC42.57■■■■■ 4.41
Gm35339A0A140LHH9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC42.57■■■■■ 4.41
Gm35339A0A140LHH9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC42.57■■■■■ 4.4
Gm35339A0A140LHH9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC42.57■■■■■ 4.4
Gm35339A0A140LHH9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC42.57■■■■■ 4.4
Gm35339A0A140LHH9 Gm44878-201ENSMUST00000205812 1295 ntBASIC42.57■■■■■ 4.4
Gm35339A0A140LHH9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC42.56■■■■■ 4.4
Gm35339A0A140LHH9 Trmt13-210ENSMUST00000198454 880 ntBASIC42.56■■■■■ 4.4
Gm35339A0A140LHH9 Gm6420-201ENSMUST00000193885 723 ntBASIC42.55■■■■■ 4.4
Gm35339A0A140LHH9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC42.55■■■■■ 4.4
Gm35339A0A140LHH9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC42.55■■■■■ 4.4
Gm35339A0A140LHH9 Gm10812-201ENSMUST00000099864 546 ntBASIC42.55■■■■■ 4.4
Gm35339A0A140LHH9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC42.54■■■■■ 4.4
Gm35339A0A140LHH9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC42.54■■■■■ 4.4
Gm35339A0A140LHH9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC42.54■■■■■ 4.4
Gm35339A0A140LHH9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC42.53■■■■■ 4.4
Gm35339A0A140LHH9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC42.53■■■■■ 4.4
Gm35339A0A140LHH9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC42.53■■■■■ 4.4
Gm35339A0A140LHH9 Gm37415-201ENSMUST00000192265 2054 ntBASIC42.53■■■■■ 4.4
Gm35339A0A140LHH9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC42.53■■■■■ 4.4
Gm35339A0A140LHH9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC42.53■■■■■ 4.4
Gm35339A0A140LHH9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC42.53■■■■■ 4.4
Gm35339A0A140LHH9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC42.53■■■■■ 4.4
Gm35339A0A140LHH9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC42.53■■■■■ 4.4
Gm35339A0A140LHH9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC42.53■■■■■ 4.4
Gm35339A0A140LHH9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC42.53■■■■■ 4.4
Gm35339A0A140LHH9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC42.52■■■■■ 4.4
Gm35339A0A140LHH9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC42.52■■■■■ 4.4
Gm35339A0A140LHH9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC42.52■■■■■ 4.4
Gm35339A0A140LHH9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC42.51■■■■■ 4.4
Gm35339A0A140LHH9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC42.51■■■■■ 4.4
Gm35339A0A140LHH9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC42.51■■■■■ 4.4
Gm35339A0A140LHH9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC42.5■■■■■ 4.39
Gm35339A0A140LHH9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC42.5■■■■■ 4.39
Gm35339A0A140LHH9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC42.5■■■■■ 4.39
Gm35339A0A140LHH9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC42.5■■■■■ 4.39
Gm35339A0A140LHH9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC42.5■■■■■ 4.39
Gm35339A0A140LHH9 Gm13181-201ENSMUST00000120117 1069 ntBASIC42.49■■■■■ 4.39
Gm35339A0A140LHH9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC42.49■■■■■ 4.39
Gm35339A0A140LHH9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC42.48■■■■■ 4.39
Gm35339A0A140LHH9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC42.48■■■■■ 4.39
Gm35339A0A140LHH9 Il17rd-202ENSMUST00000223942 2186 ntBASIC42.48■■■■■ 4.39
Gm35339A0A140LHH9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC42.48■■■■■ 4.39
Gm35339A0A140LHH9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC42.48■■■■■ 4.39
Gm35339A0A140LHH9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC42.48■■■■■ 4.39
Gm35339A0A140LHH9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC42.48■■■■■ 4.39
Gm35339A0A140LHH9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC42.47■■■■■ 4.39
Gm35339A0A140LHH9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC42.47■■■■■ 4.39
Gm35339A0A140LHH9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC42.47■■■■■ 4.39
Gm35339A0A140LHH9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC42.47■■■■■ 4.39
Gm35339A0A140LHH9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC42.46■■■■■ 4.39
Gm35339A0A140LHH9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC42.46■■■■■ 4.39
Gm35339A0A140LHH9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC42.46■■■■■ 4.39
Gm35339A0A140LHH9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC42.46■■■■■ 4.39
Gm35339A0A140LHH9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC42.46■■■■■ 4.39
Gm35339A0A140LHH9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC42.46■■■■■ 4.39
Gm35339A0A140LHH9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC42.46■■■■■ 4.39
Gm35339A0A140LHH9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC42.45■■■■■ 4.39
Gm35339A0A140LHH9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC42.45■■■■■ 4.39
Gm35339A0A140LHH9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC42.45■■■■■ 4.39
Gm35339A0A140LHH9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC42.45■■■■■ 4.39
Gm35339A0A140LHH9 AC158538.1-201ENSMUST00000225870 294 ntBASIC42.45■■■■■ 4.39
Gm35339A0A140LHH9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC42.44■■■■■ 4.38
Gm35339A0A140LHH9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC42.44■■■■■ 4.38
Gm35339A0A140LHH9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC42.44■■■■■ 4.38
Gm35339A0A140LHH9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC42.44■■■■■ 4.38
Gm35339A0A140LHH9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC42.43■■■■■ 4.38
Gm35339A0A140LHH9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC42.43■■■■■ 4.38
Gm35339A0A140LHH9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC42.42■■■■■ 4.38
Gm35339A0A140LHH9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC42.42■■■■■ 4.38
Gm35339A0A140LHH9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC42.42■■■■■ 4.38
Gm35339A0A140LHH9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC42.42■■■■■ 4.38
Gm35339A0A140LHH9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC42.42■■■■■ 4.38
Gm35339A0A140LHH9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC42.41■■■■■ 4.38
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms