Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav23A0A0G2JG17 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav23A0A0G2JG17 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.13■□□□□ 0.17
Trav23A0A0G2JG17 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav23A0A0G2JG17 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav23A0A0G2JG17 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.13■□□□□ 0.17
Trav23A0A0G2JG17 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Trav23A0A0G2JG17 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav23A0A0G2JG17 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav23A0A0G2JG17 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav23A0A0G2JG17 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav23A0A0G2JG17 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav23A0A0G2JG17 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav23A0A0G2JG17 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav23A0A0G2JG17 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.12■□□□□ 0.17
Trav23A0A0G2JG17 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav23A0A0G2JG17 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav23A0A0G2JG17 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav23A0A0G2JG17 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav23A0A0G2JG17 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav23A0A0G2JG17 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Trav23A0A0G2JG17 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.12■□□□□ 0.17
Trav23A0A0G2JG17 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav23A0A0G2JG17 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav23A0A0G2JG17 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.12■□□□□ 0.17
Trav23A0A0G2JG17 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav23A0A0G2JG17 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav23A0A0G2JG17 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav23A0A0G2JG17 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.11■□□□□ 0.17
Trav23A0A0G2JG17 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav23A0A0G2JG17 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav23A0A0G2JG17 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.11■□□□□ 0.17
Trav23A0A0G2JG17 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav23A0A0G2JG17 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav23A0A0G2JG17 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav23A0A0G2JG17 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav23A0A0G2JG17 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.11■□□□□ 0.17
Trav23A0A0G2JG17 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 Gm12821-201ENSMUST00000120022 600 ntBASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav23A0A0G2JG17 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Gm27454-201ENSMUST00000185090 204 ntBASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav23A0A0G2JG17 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav23A0A0G2JG17 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav23A0A0G2JG17 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav23A0A0G2JG17 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav23A0A0G2JG17 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav23A0A0G2JG17 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav23A0A0G2JG17 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav23A0A0G2JG17 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav23A0A0G2JG17 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav23A0A0G2JG17 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav23A0A0G2JG17 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav23A0A0G2JG17 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav23A0A0G2JG17 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trav23A0A0G2JG17 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav23A0A0G2JG17 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav23A0A0G2JG17 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav23A0A0G2JG17 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav23A0A0G2JG17 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav23A0A0G2JG17 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav23A0A0G2JG17 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav23A0A0G2JG17 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav23A0A0G2JG17 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav23A0A0G2JG17 Gm45417-201ENSMUST00000209533 758 ntBASIC16.07■□□□□ 0.16
Trav23A0A0G2JG17 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav23A0A0G2JG17 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav23A0A0G2JG17 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms