Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav13n-4A0A0G2JG01 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13n-4A0A0G2JG01 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.01■□□□□ 0.15
Trav13n-4A0A0G2JG01 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-4A0A0G2JG01 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-4A0A0G2JG01 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-4A0A0G2JG01 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-4A0A0G2JG01 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16■□□□□ 0.15
Trav13n-4A0A0G2JG01 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-4A0A0G2JG01 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16■□□□□ 0.15
Trav13n-4A0A0G2JG01 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-4A0A0G2JG01 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav13n-4A0A0G2JG01 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-4A0A0G2JG01 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-4A0A0G2JG01 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav13n-4A0A0G2JG01 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-4A0A0G2JG01 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-4A0A0G2JG01 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.99■□□□□ 0.15
Trav13n-4A0A0G2JG01 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-4A0A0G2JG01 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-4A0A0G2JG01 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-4A0A0G2JG01 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-4A0A0G2JG01 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-4A0A0G2JG01 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-4A0A0G2JG01 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav13n-4A0A0G2JG01 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-4A0A0G2JG01 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-4A0A0G2JG01 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-4A0A0G2JG01 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-4A0A0G2JG01 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-4A0A0G2JG01 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Trav13n-4A0A0G2JG01 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-4A0A0G2JG01 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav13n-4A0A0G2JG01 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-4A0A0G2JG01 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-4A0A0G2JG01 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-4A0A0G2JG01 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav13n-4A0A0G2JG01 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
Trav13n-4A0A0G2JG01 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-4A0A0G2JG01 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-4A0A0G2JG01 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trav13n-4A0A0G2JG01 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-4A0A0G2JG01 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav13n-4A0A0G2JG01 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav13n-4A0A0G2JG01 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-4A0A0G2JG01 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-4A0A0G2JG01 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-4A0A0G2JG01 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-4A0A0G2JG01 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-4A0A0G2JG01 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.95■□□□□ 0.14
Trav13n-4A0A0G2JG01 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-4A0A0G2JG01 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-4A0A0G2JG01 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav13n-4A0A0G2JG01 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-4A0A0G2JG01 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13n-4A0A0G2JG01 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav13n-4A0A0G2JG01 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.94■□□□□ 0.14
Trav13n-4A0A0G2JG01 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13n-4A0A0G2JG01 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13n-4A0A0G2JG01 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Trav13n-4A0A0G2JG01 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trav13n-4A0A0G2JG01 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.94■□□□□ 0.14
Trav13n-4A0A0G2JG01 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13n-4A0A0G2JG01 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13n-4A0A0G2JG01 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav13n-4A0A0G2JG01 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.94■□□□□ 0.14
Trav13n-4A0A0G2JG01 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13n-4A0A0G2JG01 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms