Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-1A0A0G2JEV5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-1A0A0G2JEV5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav7-1A0A0G2JEV5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-1A0A0G2JEV5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-1A0A0G2JEV5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-1A0A0G2JEV5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav7-1A0A0G2JEV5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-1A0A0G2JEV5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-1A0A0G2JEV5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-1A0A0G2JEV5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav7-1A0A0G2JEV5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav7-1A0A0G2JEV5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.23■□□□□ 0.03
Trav7-1A0A0G2JEV5 Gm7143-201ENSMUST00000222811 859 ntBASIC15.23■□□□□ 0.03
Trav7-1A0A0G2JEV5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-1A0A0G2JEV5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-1A0A0G2JEV5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-1A0A0G2JEV5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-1A0A0G2JEV5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-1A0A0G2JEV5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-1A0A0G2JEV5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trav7-1A0A0G2JEV5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav7-1A0A0G2JEV5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav7-1A0A0G2JEV5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-1A0A0G2JEV5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-1A0A0G2JEV5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-1A0A0G2JEV5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-1A0A0G2JEV5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-1A0A0G2JEV5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-1A0A0G2JEV5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.21■□□□□ 0.03
Trav7-1A0A0G2JEV5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-1A0A0G2JEV5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-1A0A0G2JEV5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-1A0A0G2JEV5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-1A0A0G2JEV5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-1A0A0G2JEV5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-1A0A0G2JEV5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-1A0A0G2JEV5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7-1A0A0G2JEV5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Trav7-1A0A0G2JEV5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7-1A0A0G2JEV5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-1A0A0G2JEV5 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.2■□□□□ 0.02
Trav7-1A0A0G2JEV5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-1A0A0G2JEV5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-1A0A0G2JEV5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-1A0A0G2JEV5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav7-1A0A0G2JEV5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav7-1A0A0G2JEV5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Trav7-1A0A0G2JEV5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-1A0A0G2JEV5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-1A0A0G2JEV5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-1A0A0G2JEV5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-1A0A0G2JEV5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-1A0A0G2JEV5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-1A0A0G2JEV5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-1A0A0G2JEV5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav7-1A0A0G2JEV5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-1A0A0G2JEV5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-1A0A0G2JEV5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-1A0A0G2JEV5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-1A0A0G2JEV5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-1A0A0G2JEV5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav7-1A0A0G2JEV5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-1A0A0G2JEV5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-1A0A0G2JEV5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-1A0A0G2JEV5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-1A0A0G2JEV5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 384.2 ms