Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.41■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.4■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.4■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Gm8495-201ENSMUST00000188740 694 ntBASIC20.4■□□□□ 0.86
Igkv5-43A0A0B4J1J2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.4■□□□□ 0.86
Igkv5-43A0A0B4J1J2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.4■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.39■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.38■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.38■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.38■□□□□ 0.85
Igkv5-43A0A0B4J1J2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.38■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.36■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.35■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Igkv5-43A0A0B4J1J2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.35■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.35■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.34■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-43A0A0B4J1J2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.34■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.34■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.33■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.33■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv5-43A0A0B4J1J2 Gm10493-201ENSMUST00000097270 612 ntBASIC20.33■□□□□ 0.85
Igkv5-43A0A0B4J1J2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.32■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.32■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Igkv5-43A0A0B4J1J2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.31■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms