Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv19A0A0B4J1H4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv19A0A0B4J1H4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv19A0A0B4J1H4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv19A0A0B4J1H4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
Trbv19A0A0B4J1H4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv19A0A0B4J1H4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv19A0A0B4J1H4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv19A0A0B4J1H4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv19A0A0B4J1H4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv19A0A0B4J1H4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv19A0A0B4J1H4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.9■□□□□ 0.14
Trbv19A0A0B4J1H4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.9■□□□□ 0.14
Trbv19A0A0B4J1H4 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.9■□□□□ 0.14
Trbv19A0A0B4J1H4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trbv19A0A0B4J1H4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv19A0A0B4J1H4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trbv19A0A0B4J1H4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv19A0A0B4J1H4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv19A0A0B4J1H4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv19A0A0B4J1H4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trbv19A0A0B4J1H4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv19A0A0B4J1H4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv19A0A0B4J1H4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trbv19A0A0B4J1H4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv19A0A0B4J1H4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv19A0A0B4J1H4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv19A0A0B4J1H4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.89■□□□□ 0.13
Trbv19A0A0B4J1H4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.89■□□□□ 0.13
Trbv19A0A0B4J1H4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Trbv19A0A0B4J1H4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv19A0A0B4J1H4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv19A0A0B4J1H4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trbv19A0A0B4J1H4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv19A0A0B4J1H4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv19A0A0B4J1H4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv19A0A0B4J1H4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.88■□□□□ 0.13
Trbv19A0A0B4J1H4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv19A0A0B4J1H4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv19A0A0B4J1H4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv19A0A0B4J1H4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv19A0A0B4J1H4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
Trbv19A0A0B4J1H4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv19A0A0B4J1H4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv19A0A0B4J1H4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv19A0A0B4J1H4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv19A0A0B4J1H4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv19A0A0B4J1H4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv19A0A0B4J1H4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trbv19A0A0B4J1H4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.86■□□□□ 0.13
Trbv19A0A0B4J1H4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv19A0A0B4J1H4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trbv19A0A0B4J1H4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.86■□□□□ 0.13
Trbv19A0A0B4J1H4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.86■□□□□ 0.13
Trbv19A0A0B4J1H4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv19A0A0B4J1H4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv19A0A0B4J1H4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trbv19A0A0B4J1H4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv19A0A0B4J1H4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trbv19A0A0B4J1H4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv19A0A0B4J1H4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv19A0A0B4J1H4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trbv19A0A0B4J1H4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv19A0A0B4J1H4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trbv19A0A0B4J1H4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv19A0A0B4J1H4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv19A0A0B4J1H4 Gm9959-201ENSMUST00000068277 390 ntBASIC15.85■□□□□ 0.13
Trbv19A0A0B4J1H4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv19A0A0B4J1H4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv19A0A0B4J1H4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv19A0A0B4J1H4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv19A0A0B4J1H4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv19A0A0B4J1H4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv19A0A0B4J1H4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.84■□□□□ 0.13
Trbv19A0A0B4J1H4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Trbv19A0A0B4J1H4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv19A0A0B4J1H4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
Trbv19A0A0B4J1H4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv19A0A0B4J1H4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 648.2 ms