Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv15A0A0A6YYE3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv15A0A0A6YYE3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv15A0A0A6YYE3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trbv15A0A0A6YYE3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv15A0A0A6YYE3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv15A0A0A6YYE3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv15A0A0A6YYE3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv15A0A0A6YYE3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv15A0A0A6YYE3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv15A0A0A6YYE3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv15A0A0A6YYE3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.46■□□□□ 0.23
Trbv15A0A0A6YYE3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv15A0A0A6YYE3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trbv15A0A0A6YYE3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Trbv15A0A0A6YYE3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trbv15A0A0A6YYE3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv15A0A0A6YYE3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv15A0A0A6YYE3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv15A0A0A6YYE3 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.44■□□□□ 0.22
Trbv15A0A0A6YYE3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trbv15A0A0A6YYE3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv15A0A0A6YYE3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv15A0A0A6YYE3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv15A0A0A6YYE3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv15A0A0A6YYE3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv15A0A0A6YYE3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trbv15A0A0A6YYE3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv15A0A0A6YYE3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv15A0A0A6YYE3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv15A0A0A6YYE3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Trbv15A0A0A6YYE3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv15A0A0A6YYE3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv15A0A0A6YYE3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv15A0A0A6YYE3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv15A0A0A6YYE3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.43■□□□□ 0.22
Trbv15A0A0A6YYE3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv15A0A0A6YYE3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv15A0A0A6YYE3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv15A0A0A6YYE3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.42■□□□□ 0.22
Trbv15A0A0A6YYE3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trbv15A0A0A6YYE3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.42■□□□□ 0.22
Trbv15A0A0A6YYE3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv15A0A0A6YYE3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv15A0A0A6YYE3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv15A0A0A6YYE3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv15A0A0A6YYE3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trbv15A0A0A6YYE3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv15A0A0A6YYE3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv15A0A0A6YYE3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trbv15A0A0A6YYE3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv15A0A0A6YYE3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv15A0A0A6YYE3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv15A0A0A6YYE3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv15A0A0A6YYE3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trbv15A0A0A6YYE3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv15A0A0A6YYE3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv15A0A0A6YYE3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv15A0A0A6YYE3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv15A0A0A6YYE3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv15A0A0A6YYE3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv15A0A0A6YYE3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv15A0A0A6YYE3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv15A0A0A6YYE3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv15A0A0A6YYE3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv15A0A0A6YYE3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv15A0A0A6YYE3 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.4■□□□□ 0.22
Trbv15A0A0A6YYE3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv15A0A0A6YYE3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv15A0A0A6YYE3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trbv15A0A0A6YYE3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trbv15A0A0A6YYE3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv15A0A0A6YYE3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv15A0A0A6YYE3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv15A0A0A6YYE3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv15A0A0A6YYE3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trbv15A0A0A6YYE3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv15A0A0A6YYE3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.39■□□□□ 0.21
Trbv15A0A0A6YYE3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.39■□□□□ 0.21
Trbv15A0A0A6YYE3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv15A0A0A6YYE3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv15A0A0A6YYE3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.38■□□□□ 0.21
Trbv15A0A0A6YYE3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms