Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.52■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.52■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv3-4A0A0A6YXF1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.52■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.51■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv3-4A0A0A6YXF1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv3-4A0A0A6YXF1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.5■□□□□ 0.23
Ighv3-4A0A0A6YXF1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ighv3-4A0A0A6YXF1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.49■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv3-4A0A0A6YXF1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Gm7514-201ENSMUST00000209475 934 ntBASIC16.48■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.46■□□□□ 0.23
Ighv3-4A0A0A6YXF1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.46■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.46■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv3-4A0A0A6YXF1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ighv3-4A0A0A6YXF1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.45■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.44■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv3-4A0A0A6YXF1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.44■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv3-4A0A0A6YXF1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms