Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28778A0A087WSK7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28778A0A087WSK7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28778A0A087WSK7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28778A0A087WSK7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28778A0A087WSK7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28778A0A087WSK7 Spcs1-204ENSMUST00000226782 949 ntBASIC16.11■□□□□ 0.17
Gm28778A0A087WSK7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Gm28778A0A087WSK7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gm28778A0A087WSK7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28778A0A087WSK7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28778A0A087WSK7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.11■□□□□ 0.17
Gm28778A0A087WSK7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28778A0A087WSK7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28778A0A087WSK7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28778A0A087WSK7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28778A0A087WSK7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28778A0A087WSK7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28778A0A087WSK7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.1■□□□□ 0.17
Gm28778A0A087WSK7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm28778A0A087WSK7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28778A0A087WSK7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28778A0A087WSK7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Gm28778A0A087WSK7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Gm28778A0A087WSK7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28778A0A087WSK7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28778A0A087WSK7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28778A0A087WSK7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28778A0A087WSK7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28778A0A087WSK7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28778A0A087WSK7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28778A0A087WSK7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28778A0A087WSK7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28778A0A087WSK7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28778A0A087WSK7 Gm12251-201ENSMUST00000117893 792 ntBASIC16.08■□□□□ 0.16
Gm28778A0A087WSK7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.08■□□□□ 0.16
Gm28778A0A087WSK7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28778A0A087WSK7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28778A0A087WSK7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28778A0A087WSK7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28778A0A087WSK7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.08■□□□□ 0.16
Gm28778A0A087WSK7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28778A0A087WSK7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28778A0A087WSK7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Gm28778A0A087WSK7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28778A0A087WSK7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.06■□□□□ 0.16
Gm28778A0A087WSK7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.06■□□□□ 0.16
Gm28778A0A087WSK7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.06■□□□□ 0.16
Gm28778A0A087WSK7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28778A0A087WSK7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28778A0A087WSK7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28778A0A087WSK7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28778A0A087WSK7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.06■□□□□ 0.16
Gm28778A0A087WSK7 Mir7075-201ENSMUST00000184187 82 ntBASIC16.06■□□□□ 0.16
Gm28778A0A087WSK7 Gm45417-201ENSMUST00000209533 758 ntBASIC16.06■□□□□ 0.16
Gm28778A0A087WSK7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28778A0A087WSK7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.06■□□□□ 0.16
Gm28778A0A087WSK7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28778A0A087WSK7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28778A0A087WSK7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.05■□□□□ 0.16
Gm28778A0A087WSK7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28778A0A087WSK7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms