Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav21-dv12A0A075B6C4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Gm9870-201ENSMUST00000063874 645 ntBASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Trav21-dv12A0A075B6C4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav21-dv12A0A075B6C4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav21-dv12A0A075B6C4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav21-dv12A0A075B6C4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav21-dv12A0A075B6C4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav21-dv12A0A075B6C4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav21-dv12A0A075B6C4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav21-dv12A0A075B6C4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav21-dv12A0A075B6C4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav21-dv12A0A075B6C4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav21-dv12A0A075B6C4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav21-dv12A0A075B6C4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav21-dv12A0A075B6C4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
Trav21-dv12A0A075B6C4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav21-dv12A0A075B6C4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav21-dv12A0A075B6C4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav21-dv12A0A075B6C4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav21-dv12A0A075B6C4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav21-dv12A0A075B6C4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav21-dv12A0A075B6C4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav21-dv12A0A075B6C4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav21-dv12A0A075B6C4 Gm9959-201ENSMUST00000068277 390 ntBASIC15.15■□□□□ 0.02
Trav21-dv12A0A075B6C4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav21-dv12A0A075B6C4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav21-dv12A0A075B6C4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav21-dv12A0A075B6C4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav21-dv12A0A075B6C4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav21-dv12A0A075B6C4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Trav21-dv12A0A075B6C4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav21-dv12A0A075B6C4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms