Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Gm15820-201ENSMUST00000201566 728 ntBASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-6A0A075B6B2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-6A0A075B6B2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-6A0A075B6B2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-6A0A075B6B2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-6A0A075B6B2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav6n-6A0A075B6B2 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.66□□□□□ -0.06
Trav6n-6A0A075B6B2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-6A0A075B6B2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-6A0A075B6B2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-6A0A075B6B2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-6A0A075B6B2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-6A0A075B6B2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-6A0A075B6B2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav6n-6A0A075B6B2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Rarb-207ENSMUST00000225921 2756 ntBASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-6A0A075B6B2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.62□□□□□ -0.07
Trav6n-6A0A075B6B2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav6n-6A0A075B6B2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-6A0A075B6B2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav6n-6A0A075B6B2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.62□□□□□ -0.07
Trav6n-6A0A075B6B2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-6A0A075B6B2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav6n-6A0A075B6B2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-6A0A075B6B2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav6n-6A0A075B6B2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms