Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-4A0A075B654 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-4A0A075B654 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-4A0A075B654 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-4A0A075B654 Terc-201ENSMUST00000082862 423 ntBASIC13.33□□□□□ -0.28
Trav3-4A0A075B654 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-4A0A075B654 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-4A0A075B654 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-4A0A075B654 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-4A0A075B654 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Trav3-4A0A075B654 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-4A0A075B654 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Gm4799-201ENSMUST00000095396 657 ntBASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav3-4A0A075B654 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-4A0A075B654 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-4A0A075B654 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Trav3-4A0A075B654 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-4A0A075B654 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav3-4A0A075B654 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav3-4A0A075B654 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-4A0A075B654 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-4A0A075B654 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav3-4A0A075B654 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-4A0A075B654 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-4A0A075B654 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms