Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.06
Trav4-4-dv10A0A075B651 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-4-dv10A0A075B651 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-4-dv10A0A075B651 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-4-dv10A0A075B651 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav4-4-dv10A0A075B651 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-4-dv10A0A075B651 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav4-4-dv10A0A075B651 Gm43566-201ENSMUST00000196851 808 ntBASIC15.45■□□□□ 0.06
Trav4-4-dv10A0A075B651 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-4-dv10A0A075B651 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-4-dv10A0A075B651 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-4-dv10A0A075B651 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-4-dv10A0A075B651 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav4-4-dv10A0A075B651 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-4-dv10A0A075B651 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-4-dv10A0A075B651 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-4-dv10A0A075B651 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-4-dv10A0A075B651 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-4-dv10A0A075B651 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-4-dv10A0A075B651 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-4-dv10A0A075B651 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav4-4-dv10A0A075B651 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-4-dv10A0A075B651 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.44■□□□□ 0.06
Trav4-4-dv10A0A075B651 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-4-dv10A0A075B651 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav4-4-dv10A0A075B651 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-4-dv10A0A075B651 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-4-dv10A0A075B651 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav4-4-dv10A0A075B651 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-4-dv10A0A075B651 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Mir6236-201ENSMUST00000184437 123 ntBASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-4-dv10A0A075B651 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav4-4-dv10A0A075B651 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav4-4-dv10A0A075B651 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav4-4-dv10A0A075B651 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-4-dv10A0A075B651 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav4-4-dv10A0A075B651 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-4-dv10A0A075B651 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.42■□□□□ 0.06
Trav4-4-dv10A0A075B651 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-4-dv10A0A075B651 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav4-4-dv10A0A075B651 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-4-dv10A0A075B651 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-4-dv10A0A075B651 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav4-4-dv10A0A075B651 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-4-dv10A0A075B651 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-4-dv10A0A075B651 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-4-dv10A0A075B651 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-4-dv10A0A075B651 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-4-dv10A0A075B651 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav4-4-dv10A0A075B651 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-4-dv10A0A075B651 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-4-dv10A0A075B651 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Trav4-4-dv10A0A075B651 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-4-dv10A0A075B651 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-4-dv10A0A075B651 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-4-dv10A0A075B651 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav4-4-dv10A0A075B651 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-4-dv10A0A075B651 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-4-dv10A0A075B651 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-4-dv10A0A075B651 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-4-dv10A0A075B651 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-4-dv10A0A075B651 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav4-4-dv10A0A075B651 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-4-dv10A0A075B651 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-4-dv10A0A075B651 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-4-dv10A0A075B651 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav4-4-dv10A0A075B651 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav4-4-dv10A0A075B651 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-4-dv10A0A075B651 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-4-dv10A0A075B651 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav4-4-dv10A0A075B651 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-4-dv10A0A075B651 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-4-dv10A0A075B651 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-4-dv10A0A075B651 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-4-dv10A0A075B651 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-4-dv10A0A075B651 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.39■□□□□ 0.05
Trav4-4-dv10A0A075B651 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.39■□□□□ 0.05
Trav4-4-dv10A0A075B651 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.39■□□□□ 0.05
Trav4-4-dv10A0A075B651 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-4-dv10A0A075B651 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav4-4-dv10A0A075B651 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-4-dv10A0A075B651 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav4-4-dv10A0A075B651 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-4-dv10A0A075B651 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms