Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12-3A0A075B648 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Trav12-3A0A075B648 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav12-3A0A075B648 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12-3A0A075B648 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12-3A0A075B648 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12-3A0A075B648 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12-3A0A075B648 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12-3A0A075B648 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav12-3A0A075B648 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12-3A0A075B648 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12-3A0A075B648 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.48□□□□□ -0.09
Trav12-3A0A075B648 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav12-3A0A075B648 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav12-3A0A075B648 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12-3A0A075B648 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12-3A0A075B648 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav12-3A0A075B648 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav12-3A0A075B648 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12-3A0A075B648 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12-3A0A075B648 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12-3A0A075B648 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12-3A0A075B648 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-3A0A075B648 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav12-3A0A075B648 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-3A0A075B648 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-3A0A075B648 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Trav12-3A0A075B648 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-3A0A075B648 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-3A0A075B648 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav12-3A0A075B648 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-3A0A075B648 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-3A0A075B648 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-3A0A075B648 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12-3A0A075B648 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12-3A0A075B648 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12-3A0A075B648 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12-3A0A075B648 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12-3A0A075B648 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12-3A0A075B648 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC14.46□□□□□ -0.1
Trav12-3A0A075B648 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12-3A0A075B648 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12-3A0A075B648 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12-3A0A075B648 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.46□□□□□ -0.1
Trav12-3A0A075B648 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.46□□□□□ -0.1
Trav12-3A0A075B648 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12-3A0A075B648 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12-3A0A075B648 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-3A0A075B648 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-3A0A075B648 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-3A0A075B648 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-3A0A075B648 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav12-3A0A075B648 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav12-3A0A075B648 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-3A0A075B648 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-3A0A075B648 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-3A0A075B648 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-3A0A075B648 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.44□□□□□ -0.1
Trav12-3A0A075B648 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-3A0A075B648 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12-3A0A075B648 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-3A0A075B648 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-3A0A075B648 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-3A0A075B648 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-3A0A075B648 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-3A0A075B648 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms