Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav13-1A0A075B644 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-1A0A075B644 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-1A0A075B644 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-1A0A075B644 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-1A0A075B644 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-1A0A075B644 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-1A0A075B644 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-1A0A075B644 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-1A0A075B644 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-1A0A075B644 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.02□□□□□ -0.16
Trav13-1A0A075B644 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13-1A0A075B644 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav13-1A0A075B644 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13-1A0A075B644 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav13-1A0A075B644 Gm6139-201ENSMUST00000079261 882 ntBASIC14.02□□□□□ -0.17
Trav13-1A0A075B644 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13-1A0A075B644 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav13-1A0A075B644 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Trav13-1A0A075B644 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13-1A0A075B644 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13-1A0A075B644 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-1A0A075B644 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav13-1A0A075B644 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Trav13-1A0A075B644 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav13-1A0A075B644 Gm43017-201ENSMUST00000198296 752 ntBASIC14.01□□□□□ -0.17
Trav13-1A0A075B644 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-1A0A075B644 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-1A0A075B644 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.01□□□□□ -0.17
Trav13-1A0A075B644 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
Trav13-1A0A075B644 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trav13-1A0A075B644 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-1A0A075B644 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-1A0A075B644 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-1A0A075B644 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-1A0A075B644 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-1A0A075B644 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-1A0A075B644 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.97□□□□□ -0.17
Trav13-1A0A075B644 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-1A0A075B644 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
Trav13-1A0A075B644 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-1A0A075B644 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav13-1A0A075B644 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-1A0A075B644 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC13.97□□□□□ -0.17
Trav13-1A0A075B644 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-1A0A075B644 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav13-1A0A075B644 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-1A0A075B644 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-1A0A075B644 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms