Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-1A0A075B5Z8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-1A0A075B5Z8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-1A0A075B5Z8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.94■□□□□ 0.14
Trav6-1A0A075B5Z8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-1A0A075B5Z8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trav6-1A0A075B5Z8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-1A0A075B5Z8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-1A0A075B5Z8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav6-1A0A075B5Z8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-1A0A075B5Z8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-1A0A075B5Z8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav6-1A0A075B5Z8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav6-1A0A075B5Z8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav6-1A0A075B5Z8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.93■□□□□ 0.14
Trav6-1A0A075B5Z8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-1A0A075B5Z8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-1A0A075B5Z8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-1A0A075B5Z8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-1A0A075B5Z8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-1A0A075B5Z8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-1A0A075B5Z8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-1A0A075B5Z8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-1A0A075B5Z8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav6-1A0A075B5Z8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-1A0A075B5Z8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-1A0A075B5Z8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.92■□□□□ 0.14
Trav6-1A0A075B5Z8 Mir6236-201ENSMUST00000184437 123 ntBASIC15.92■□□□□ 0.14
Trav6-1A0A075B5Z8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-1A0A075B5Z8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav6-1A0A075B5Z8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-1A0A075B5Z8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-1A0A075B5Z8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-1A0A075B5Z8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-1A0A075B5Z8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-1A0A075B5Z8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-1A0A075B5Z8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-1A0A075B5Z8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav6-1A0A075B5Z8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-1A0A075B5Z8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Trav6-1A0A075B5Z8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-1A0A075B5Z8 Gm43566-201ENSMUST00000196851 808 ntBASIC15.91■□□□□ 0.14
Trav6-1A0A075B5Z8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-1A0A075B5Z8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-1A0A075B5Z8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-1A0A075B5Z8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav6-1A0A075B5Z8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-1A0A075B5Z8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-1A0A075B5Z8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-1A0A075B5Z8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-1A0A075B5Z8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-1A0A075B5Z8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-1A0A075B5Z8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-1A0A075B5Z8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-1A0A075B5Z8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.9■□□□□ 0.14
Trav6-1A0A075B5Z8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-1A0A075B5Z8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-1A0A075B5Z8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav6-1A0A075B5Z8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-1A0A075B5Z8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-1A0A075B5Z8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Trav6-1A0A075B5Z8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-1A0A075B5Z8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-1A0A075B5Z8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-1A0A075B5Z8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-1A0A075B5Z8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-1A0A075B5Z8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.89■□□□□ 0.13
Trav6-1A0A075B5Z8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-1A0A075B5Z8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-1A0A075B5Z8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-1A0A075B5Z8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-1A0A075B5Z8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav6-1A0A075B5Z8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-1A0A075B5Z8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-1A0A075B5Z8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-1A0A075B5Z8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-1A0A075B5Z8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-1A0A075B5Z8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav6-1A0A075B5Z8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav6-1A0A075B5Z8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav6-1A0A075B5Z8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-1A0A075B5Z8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-1A0A075B5Z8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-1A0A075B5Z8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-1A0A075B5Z8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-1A0A075B5Z8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-1A0A075B5Z8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-1A0A075B5Z8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-1A0A075B5Z8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-1A0A075B5Z8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav6-1A0A075B5Z8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms