Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trav5-1A0A075B5Z7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav5-1A0A075B5Z7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav5-1A0A075B5Z7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trav5-1A0A075B5Z7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav5-1A0A075B5Z7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5-1A0A075B5Z7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
Trav5-1A0A075B5Z7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Trav5-1A0A075B5Z7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav5-1A0A075B5Z7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5-1A0A075B5Z7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5-1A0A075B5Z7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 Gm11421-201ENSMUST00000122124 294 ntBASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 Gm43060-201ENSMUST00000200621 289 ntBASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.06■□□□□ 0.32
Trav5-1A0A075B5Z7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav5-1A0A075B5Z7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-1A0A075B5Z7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.05■□□□□ 0.32
Trav5-1A0A075B5Z7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-1A0A075B5Z7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-1A0A075B5Z7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-1A0A075B5Z7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-1A0A075B5Z7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.05■□□□□ 0.32
Trav5-1A0A075B5Z7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-1A0A075B5Z7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-1A0A075B5Z7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-1A0A075B5Z7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-1A0A075B5Z7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.05■□□□□ 0.32
Trav5-1A0A075B5Z7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Trav5-1A0A075B5Z7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-1A0A075B5Z7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-1A0A075B5Z7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-1A0A075B5Z7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-1A0A075B5Z7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav5-1A0A075B5Z7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-1A0A075B5Z7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav5-1A0A075B5Z7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-1A0A075B5Z7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-1A0A075B5Z7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav5-1A0A075B5Z7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-1A0A075B5Z7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-1A0A075B5Z7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-1A0A075B5Z7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav5-1A0A075B5Z7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5-1A0A075B5Z7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.03■□□□□ 0.32
Trav5-1A0A075B5Z7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trav5-1A0A075B5Z7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5-1A0A075B5Z7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5-1A0A075B5Z7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-1A0A075B5Z7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav5-1A0A075B5Z7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav5-1A0A075B5Z7 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.02■□□□□ 0.31
Trav5-1A0A075B5Z7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav5-1A0A075B5Z7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Trav5-1A0A075B5Z7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav5-1A0A075B5Z7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.01■□□□□ 0.31
Trav5-1A0A075B5Z7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 199.1 ms