Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Golgb1-201ENSMUST00000023534 498 ntBASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv4A0A075B5I2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv4A0A075B5I2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv4A0A075B5I2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv4A0A075B5I2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv4A0A075B5I2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Trbv4A0A075B5I2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.94■□□□□ 0.78
Trbv4A0A075B5I2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv4A0A075B5I2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trbv4A0A075B5I2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.93■□□□□ 0.78
Trbv4A0A075B5I2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv4A0A075B5I2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.93■□□□□ 0.78
Trbv4A0A075B5I2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv4A0A075B5I2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv4A0A075B5I2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv4A0A075B5I2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.92■□□□□ 0.78
Trbv4A0A075B5I2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.92■□□□□ 0.78
Trbv4A0A075B5I2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Trbv4A0A075B5I2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv4A0A075B5I2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv4A0A075B5I2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv4A0A075B5I2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv4A0A075B5I2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.92■□□□□ 0.78
Trbv4A0A075B5I2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv4A0A075B5I2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv4A0A075B5I2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv4A0A075B5I2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv4A0A075B5I2 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.92■□□□□ 0.78
Trbv4A0A075B5I2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trbv4A0A075B5I2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trbv4A0A075B5I2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trbv4A0A075B5I2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trbv4A0A075B5I2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.91■□□□□ 0.78
Trbv4A0A075B5I2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trbv4A0A075B5I2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trbv4A0A075B5I2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trbv4A0A075B5I2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
Trbv4A0A075B5I2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.9■□□□□ 0.78
Trbv4A0A075B5I2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.9■□□□□ 0.78
Trbv4A0A075B5I2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv4A0A075B5I2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv4A0A075B5I2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv4A0A075B5I2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
Trbv4A0A075B5I2 Golph3-202ENSMUST00000226517 2359 ntBASIC19.9■□□□□ 0.78
Trbv4A0A075B5I2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv4A0A075B5I2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Trbv4A0A075B5I2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.89■□□□□ 0.77
Trbv4A0A075B5I2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.89■□□□□ 0.77
Trbv4A0A075B5I2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbv4A0A075B5I2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbv4A0A075B5I2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbv4A0A075B5I2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbv4A0A075B5I2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
Trbv4A0A075B5I2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv4A0A075B5I2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.87■□□□□ 0.77
Trbv4A0A075B5I2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trbv4A0A075B5I2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Trbv4A0A075B5I2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Trbv4A0A075B5I2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv4A0A075B5I2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Trbv4A0A075B5I2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv4A0A075B5I2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv4A0A075B5I2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv4A0A075B5I2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv4A0A075B5I2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.86■□□□□ 0.77
Trbv4A0A075B5I2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv4A0A075B5I2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv4A0A075B5I2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv4A0A075B5I2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Trbv4A0A075B5I2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv4A0A075B5I2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv4A0A075B5I2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trbv4A0A075B5I2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.85■□□□□ 0.77
Trbv4A0A075B5I2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Trbv4A0A075B5I2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.85■□□□□ 0.77
Trbv4A0A075B5I2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv4A0A075B5I2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv4A0A075B5I2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv4A0A075B5I2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms