Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Sec61a2Q9JLR1 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Sec61a2Q9JLR1 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Sec61a2Q9JLR1 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.4□□□□□ -0.91
Sec61a2Q9JLR1 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm7278-201ENSMUST00000119836 1401 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm11619-201ENSMUST00000117474 237 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm22877-201ENSMUST00000175451 105 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm5700-201ENSMUST00000191483 989 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm37860-201ENSMUST00000195380 1034 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm42780-201ENSMUST00000197083 734 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm42710-201ENSMUST00000200608 985 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm7319-201ENSMUST00000210047 778 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm26670-202ENSMUST00000226862 340 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Mir194-2-201ENSMUST00000083648 86 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm37648-201ENSMUST00000192072 2563 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm29101-201ENSMUST00000188329 1471 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gm5697-201ENSMUST00000122295 2482 ntBASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Fkbp15-201ENSMUST00000084527 4264 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61a2Q9JLR1 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Gm44740-201ENSMUST00000205603 1614 ntBASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Gm42587-201ENSMUST00000198462 1981 ntBASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Gm14213-201ENSMUST00000119778 768 ntBASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Gm11824-201ENSMUST00000120191 846 ntBASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Gm23218-201ENSMUST00000158124 276 ntBASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Gm7719-201ENSMUST00000182374 975 ntBASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms