Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Gm43307-201ENSMUST00000199465 2371 ntBASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Gm16478-201ENSMUST00000208113 5084 ntBASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdhga4Q91XY4 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Gm8659-201ENSMUST00000120024 1084 ntBASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Gm37597-201ENSMUST00000191853 382 ntBASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Gm42803-201ENSMUST00000201051 451 ntBASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 CT025689.1-201ENSMUST00000225214 283 ntBASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdhga4Q91XY4 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Mir8111-201ENSMUST00000184463 137 ntBASIC10.29□□□□□ -0.76
Pcdhga4Q91XY4 Gm5621-201ENSMUST00000187303 640 ntBASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms