Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.81□□□□□ -0.84
Clrn1Q8K445 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm44975-201ENSMUST00000207435 1390 ntBASIC9.81□□□□□ -0.84
Clrn1Q8K445 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm32914-201ENSMUST00000203815 2228 ntBASIC9.81□□□□□ -0.84
Clrn1Q8K445 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm13899-201ENSMUST00000121519 1255 ntBASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm11354-201ENSMUST00000121974 422 ntBASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm28671-201ENSMUST00000187036 692 ntBASIC9.81□□□□□ -0.84
Clrn1Q8K445 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm5700-201ENSMUST00000191483 989 ntBASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm19166-201ENSMUST00000196041 1063 ntBASIC9.81□□□□□ -0.84
Clrn1Q8K445 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Clrn1Q8K445 AC126459.1-201ENSMUST00000214791 2123 ntBASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm7959-201ENSMUST00000221823 1078 ntBASIC9.81□□□□□ -0.84
Clrn1Q8K445 AC158986.2-201ENSMUST00000227487 618 ntBASIC9.81□□□□□ -0.84
Clrn1Q8K445 AC137871.1-201ENSMUST00000228278 475 ntBASIC9.81□□□□□ -0.84
Clrn1Q8K445 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Clrn1Q8K445 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Fhad1-203ENSMUST00000105780 4809 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Cdc6-201ENSMUST00000092706 4614 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Gm14231-201ENSMUST00000120090 592 ntBASIC9.8□□□□□ -0.84
Clrn1Q8K445 Gm11701-201ENSMUST00000121277 1142 ntBASIC9.8□□□□□ -0.84
Clrn1Q8K445 Gm15620-201ENSMUST00000122949 270 ntBASIC9.8□□□□□ -0.84
Clrn1Q8K445 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Gm5526-201ENSMUST00000153604 423 ntBASIC9.8□□□□□ -0.84
Clrn1Q8K445 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Clrn1Q8K445 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Gm37020-201ENSMUST00000195303 992 ntBASIC9.8□□□□□ -0.84
Clrn1Q8K445 Gm43371-201ENSMUST00000202838 1031 ntBASIC9.8□□□□□ -0.84
Clrn1Q8K445 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC9.8□□□□□ -0.84
Clrn1Q8K445 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC9.8□□□□□ -0.84
Clrn1Q8K445 AC174797.2-202ENSMUST00000225729 568 ntBASIC9.8□□□□□ -0.84
Clrn1Q8K445 AC164883.7-201ENSMUST00000228534 851 ntBASIC9.8□□□□□ -0.84
Clrn1Q8K445 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Gm6783-201ENSMUST00000120916 1437 ntBASIC9.8□□□□□ -0.84
Clrn1Q8K445 Gm43622-201ENSMUST00000200140 2019 ntBASIC9.8□□□□□ -0.84
Clrn1Q8K445 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Gm10652-201ENSMUST00000199790 2622 ntBASIC9.8□□□□□ -0.84
Clrn1Q8K445 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.8□□□□□ -0.84
Clrn1Q8K445 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms