Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Gm37976-201ENSMUST00000193827 345 ntBASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Gm43305-202ENSMUST00000225083 705 ntBASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Gm12912-201ENSMUST00000121596 1381 ntBASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Gm6686-201ENSMUST00000178455 258 ntBASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Opalin-201ENSMUST00000087176 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Gm38111-201ENSMUST00000194817 2741 ntBASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Ssb-206ENSMUST00000166411 2088 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Gm37975-201ENSMUST00000195494 2099 ntBASIC10.69□□□□□ -0.7
Trub1Q8C0D0 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Gm11619-201ENSMUST00000117474 237 ntBASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Gm13039-201ENSMUST00000118638 794 ntBASIC10.68□□□□□ -0.7
Trub1Q8C0D0 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms