Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm12752-201ENSMUST00000121657 811 ntBASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm44304-201ENSMUST00000200509 145 ntBASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm44683-201ENSMUST00000209088 484 ntBASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 CT010505.2-201ENSMUST00000227918 998 ntBASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm8873-201ENSMUST00000217847 1439 ntBASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 AC124561.1-202ENSMUST00000228652 1929 ntBASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Mir291b-201ENSMUST00000104838 79 ntBASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm26208-201ENSMUST00000158677 124 ntBASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm38321-201ENSMUST00000195053 235 ntBASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm8796-201ENSMUST00000219122 936 ntBASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm7242-201ENSMUST00000221134 705 ntBASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 AC154252.1-201ENSMUST00000226041 473 ntBASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm5424-201ENSMUST00000053865 1240 ntBASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms