Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 AC130671.3-201ENSMUST00000227393 1897 ntBASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Gm22662-201ENSMUST00000175290 256 ntBASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Gm24954-201ENSMUST00000178831 110 ntBASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Gm28391-201ENSMUST00000185202 379 ntBASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Gm29528-201ENSMUST00000186699 379 ntBASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Gm29526-201ENSMUST00000187217 379 ntBASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Gm5130-201ENSMUST00000210233 959 ntBASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.46□□□□□ -0.41
Vps54Q5SPW0 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.46□□□□□ -0.41
Vps54Q5SPW0 AC242269.1-201ENSMUST00000227020 741 ntBASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Mir326-201ENSMUST00000083637 95 ntBASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Ttll7-203ENSMUST00000106134 2664 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps54Q5SPW0 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC12.46□□□□□ -0.42
Vps54Q5SPW0 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps54Q5SPW0 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Vps54Q5SPW0 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps54Q5SPW0 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps54Q5SPW0 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps54Q5SPW0 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Vps54Q5SPW0 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC12.46□□□□□ -0.42
Vps54Q5SPW0 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Vps54Q5SPW0 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps54Q5SPW0 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Gm20953-201ENSMUST00000216399 2614 ntBASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Gm23255-201ENSMUST00000102244 110 ntBASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Gm12733-201ENSMUST00000119871 767 ntBASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Gm24140-201ENSMUST00000122773 326 ntBASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Gm25998-201ENSMUST00000175397 53 ntBASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Gm2716-201ENSMUST00000212350 643 ntBASIC12.45□□□□□ -0.42
Vps54Q5SPW0 AC137950.2-201ENSMUST00000227127 1089 ntBASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps54Q5SPW0 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Blnk-201ENSMUST00000054769 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm5310-201ENSMUST00000197861 1511 ntBASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm23595-201ENSMUST00000104306 130 ntBASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm13792-201ENSMUST00000121350 423 ntBASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm26368-201ENSMUST00000157826 118 ntBASIC12.44□□□□□ -0.42
Vps54Q5SPW0 Gm6612-201ENSMUST00000170777 395 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms