Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rc3h1Q4VGL6 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rc3h1Q4VGL6 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rc3h1Q4VGL6 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rc3h1Q4VGL6 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rc3h1Q4VGL6 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.17□□□□□ -0.46
Rc3h1Q4VGL6 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC12.17□□□□□ -0.46
Rc3h1Q4VGL6 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rc3h1Q4VGL6 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rc3h1Q4VGL6 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rc3h1Q4VGL6 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rc3h1Q4VGL6 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.17□□□□□ -0.46
Rc3h1Q4VGL6 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Gm24470-201ENSMUST00000104486 132 ntBASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Gm11893-201ENSMUST00000117829 491 ntBASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Gm28916-201ENSMUST00000186988 699 ntBASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Gm10297-201ENSMUST00000207136 651 ntBASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Gm44554-201ENSMUST00000208738 147 ntBASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Gm7242-201ENSMUST00000221134 705 ntBASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 AC139155.1-201ENSMUST00000226043 444 ntBASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rc3h1Q4VGL6 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 AC125351.1-201ENSMUST00000221438 2223 ntBASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Gm38111-201ENSMUST00000194817 2741 ntBASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 A1cf-204ENSMUST00000224564 1432 ntBASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Gm20091-201ENSMUST00000179683 189 ntBASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Gm27444-201ENSMUST00000184157 137 ntBASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Gm28391-201ENSMUST00000185202 379 ntBASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Gm29528-201ENSMUST00000186699 379 ntBASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Gm29526-201ENSMUST00000187217 379 ntBASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms