Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 4930503B20Rik-201ENSMUST00000049703 2080 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Arhgap36-201ENSMUST00000042444 2733 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Gm44741-201ENSMUST00000207503 2127 ntBASIC11□□□□□ -0.65
Trim43aQ3TL54 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Mbd1-201ENSMUST00000097530 2833 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11□□□□□ -0.65
Trim43aQ3TL54 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Ak3l2-ps-201ENSMUST00000120282 672 ntBASIC11□□□□□ -0.65
Trim43aQ3TL54 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Mir1956-201ENSMUST00000157748 65 ntBASIC11□□□□□ -0.65
Trim43aQ3TL54 Gm38210-201ENSMUST00000191944 809 ntBASIC11□□□□□ -0.65
Trim43aQ3TL54 Gm42657-201ENSMUST00000201746 211 ntBASIC11□□□□□ -0.65
Trim43aQ3TL54 Gm18561-201ENSMUST00000206027 804 ntBASIC11□□□□□ -0.65
Trim43aQ3TL54 Gm44814-201ENSMUST00000207018 434 ntBASIC11□□□□□ -0.65
Trim43aQ3TL54 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 AC166341.2-201ENSMUST00000220571 120 ntBASIC11□□□□□ -0.65
Trim43aQ3TL54 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11□□□□□ -0.65
Trim43aQ3TL54 Lgi3-203ENSMUST00000226548 1001 ntBASIC11□□□□□ -0.65
Trim43aQ3TL54 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Olfr1189-201ENSMUST00000090700 921 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Sftpa1-202ENSMUST00000170719 2854 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Gm37484-201ENSMUST00000195378 2523 ntBASIC11□□□□□ -0.65
Trim43aQ3TL54 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Dhcr7-202ENSMUST00000124340 2556 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Sh3kbp1-204ENSMUST00000112451 3914 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim43aQ3TL54 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC11□□□□□ -0.65
Trim43aQ3TL54 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Ddhd2-201ENSMUST00000033975 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Gm11544-201ENSMUST00000120215 382 ntBASIC10.99□□□□□ -0.65
Trim43aQ3TL54 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Gm4430-202ENSMUST00000193902 1041 ntBASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Gm2253-201ENSMUST00000211775 414 ntBASIC10.99□□□□□ -0.65
Trim43aQ3TL54 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.99□□□□□ -0.65
Trim43aQ3TL54 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Dnajb13-204ENSMUST00000207405 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 4930429F24Rik-201ENSMUST00000151676 1520 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 AC117245.3-201ENSMUST00000217495 2176 ntBASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim43aQ3TL54 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim43aQ3TL54 Gulo-201ENSMUST00000059970 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms