Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cux1P53564 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cux1P53564 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cux1P53564 Gm12738-201ENSMUST00000122349 536 ntBASIC15.8■□□□□ 0.12
Cux1P53564 Gm15280-201ENSMUST00000126961 640 ntBASIC15.8■□□□□ 0.12
Cux1P53564 2310026L22Rik-201ENSMUST00000146658 400 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cux1P53564 Ube4bos2-201ENSMUST00000154000 317 ntTSL 3 BASIC15.8■□□□□ 0.12
Cux1P53564 Gm23820-201ENSMUST00000158450 300 ntBASIC15.8■□□□□ 0.12
Cux1P53564 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cux1P53564 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cux1P53564 Zfp389-202ENSMUST00000224437 1234 ntBASIC15.8■□□□□ 0.12
Cux1P53564 AC158122.1-201ENSMUST00000227398 673 ntBASIC15.8■□□□□ 0.12
Cux1P53564 Tpm1-203ENSMUST00000050905 1259 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cux1P53564 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cux1P53564 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cux1P53564 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cux1P53564 Zfp819-202ENSMUST00000116324 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cux1P53564 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cux1P53564 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cux1P53564 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cux1P53564 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC15.8■□□□□ 0.12
Cux1P53564 Cenpn-201ENSMUST00000034205 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC15.79■□□□□ 0.12
Cux1P53564 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC15.79■□□□□ 0.12
Cux1P53564 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC15.79■□□□□ 0.12
Cux1P53564 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Gm13071-201ENSMUST00000122237 376 ntBASIC15.79■□□□□ 0.12
Cux1P53564 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC15.79■□□□□ 0.12
Cux1P53564 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC15.79■□□□□ 0.12
Cux1P53564 Gm21818-201ENSMUST00000178828 513 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cux1P53564 Gm7337-201ENSMUST00000180954 1125 ntBASIC15.79■□□□□ 0.12
Cux1P53564 Mir6909-201ENSMUST00000184212 62 ntBASIC15.79■□□□□ 0.12
Cux1P53564 Gm27675-201ENSMUST00000184527 94 ntBASIC15.79■□□□□ 0.12
Cux1P53564 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cux1P53564 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC15.79■□□□□ 0.12
Cux1P53564 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Gm5130-201ENSMUST00000210233 959 ntBASIC15.79■□□□□ 0.12
Cux1P53564 CT025538.1-201ENSMUST00000223638 369 ntBASIC15.79■□□□□ 0.12
Cux1P53564 AC119177.2-201ENSMUST00000226699 629 ntBASIC15.79■□□□□ 0.12
Cux1P53564 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cux1P53564 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Cux1P53564 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 G6pc-201ENSMUST00000019469 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Gm37484-201ENSMUST00000195378 2523 ntBASIC15.79■□□□□ 0.12
Cux1P53564 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 Gm44167-201ENSMUST00000204957 1878 ntBASIC15.79■□□□□ 0.12
Cux1P53564 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cux1P53564 AC154528.2-201ENSMUST00000228432 3023 ntBASIC15.79■□□□□ 0.12
Cux1P53564 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC15.79■□□□□ 0.12
Cux1P53564 Cox4i2-202ENSMUST00000109821 733 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Rpl19-ps11-201ENSMUST00000122422 591 ntBASIC15.78■□□□□ 0.12
Cux1P53564 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC15.78■□□□□ 0.12
Cux1P53564 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC15.78■□□□□ 0.12
Cux1P53564 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cux1P53564 1700034B16Rik-201ENSMUST00000180957 722 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Gm6946-201ENSMUST00000182237 987 ntBASIC15.78■□□□□ 0.12
Cux1P53564 Gm17868-201ENSMUST00000192761 668 ntBASIC15.78■□□□□ 0.12
Cux1P53564 Ighv5-1-201ENSMUST00000193324 353 ntBASIC15.78■□□□□ 0.12
Cux1P53564 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC15.78■□□□□ 0.12
Cux1P53564 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Gm5397-201ENSMUST00000121081 1453 ntBASIC15.78■□□□□ 0.12
Cux1P53564 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cux1P53564 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC15.78■□□□□ 0.12
Cux1P53564 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC15.78■□□□□ 0.12
Cux1P53564 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC15.78■□□□□ 0.12
Cux1P53564 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC15.78■□□□□ 0.12
Cux1P53564 Gm6633-201ENSMUST00000173851 270 ntBASIC15.78■□□□□ 0.12
Cux1P53564 Gm10318-201ENSMUST00000186874 930 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cux1P53564 Gm37583-201ENSMUST00000195460 2487 ntBASIC15.78■□□□□ 0.12
Cux1P53564 Igkv3-11-201ENSMUST00000197500 385 ntBASIC15.78■□□□□ 0.12
Cux1P53564 Abcc9-205ENSMUST00000204870 1458 ntTSL 2 BASIC15.78■□□□□ 0.12
Cux1P53564 Gm44658-201ENSMUST00000207965 637 ntBASIC15.78■□□□□ 0.12
Cux1P53564 AC167234.1-201ENSMUST00000219929 279 ntBASIC15.78■□□□□ 0.12
Cux1P53564 Prune2-202ENSMUST00000223920 1803 ntBASIC15.78■□□□□ 0.12
Cux1P53564 AC170810.2-201ENSMUST00000228384 1232 ntBASIC15.78■□□□□ 0.12
Cux1P53564 Cyp2c44-201ENSMUST00000026211 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Gm10530-201ENSMUST00000097514 1169 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cux1P53564 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cux1P53564 Prpf39-201ENSMUST00000120580 4069 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms