Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Gm37516-201ENSMUST00000192593 1954 ntBASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Gm11628-201ENSMUST00000117568 171 ntBASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Gm12397-201ENSMUST00000117674 615 ntBASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Gm16459-201ENSMUST00000121443 686 ntBASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Gm25677-201ENSMUST00000174983 72 ntBASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 AC154585.1-201ENSMUST00000218917 997 ntBASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 AC134860.2-201ENSMUST00000225277 1036 ntBASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Gm32914-201ENSMUST00000203815 2228 ntBASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Chmp2aQ9DB34 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Slc5a1-201ENSMUST00000011178 4104 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 AC022682.1-201ENSMUST00000224624 2023 ntBASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gm8216-201ENSMUST00000117232 601 ntBASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gm8482-201ENSMUST00000117972 471 ntBASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gm13841-201ENSMUST00000118829 483 ntBASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Selenot-ps-201ENSMUST00000119098 593 ntBASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gm11449-201ENSMUST00000119175 476 ntBASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gm8210-201ENSMUST00000178557 483 ntBASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gm15454-201ENSMUST00000179718 483 ntBASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gm45893-201ENSMUST00000211899 247 ntBASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 CT025689.1-201ENSMUST00000225214 283 ntBASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gm6344-201ENSMUST00000075962 483 ntBASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms