Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Ybx1P62960 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Gm15626-201ENSMUST00000117478 868 ntBASIC10.72□□□□□ -0.69
Ybx1P62960 Gm11929-201ENSMUST00000118175 945 ntBASIC10.72□□□□□ -0.69
Ybx1P62960 Gm12345-201ENSMUST00000119288 898 ntBASIC10.72□□□□□ -0.69
Ybx1P62960 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC10.72□□□□□ -0.69
Ybx1P62960 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC10.72□□□□□ -0.69
Ybx1P62960 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC10.72□□□□□ -0.69
Ybx1P62960 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC10.72□□□□□ -0.69
Ybx1P62960 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC10.72□□□□□ -0.69
Ybx1P62960 AC130217.1-201ENSMUST00000224146 909 ntBASIC10.72□□□□□ -0.69
Ybx1P62960 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Gm26440-201ENSMUST00000082591 129 ntBASIC10.72□□□□□ -0.69
Ybx1P62960 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ybx1P62960 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.72□□□□□ -0.69
Ybx1P62960 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC10.72□□□□□ -0.69
Ybx1P62960 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.72□□□□□ -0.69
Ybx1P62960 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.72□□□□□ -0.69
Ybx1P62960 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ybx1P62960 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.72□□□□□ -0.69
Ybx1P62960 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Ybx1P62960 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ybx1P62960 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC10.71□□□□□ -0.69
Ybx1P62960 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Gm15032-201ENSMUST00000118547 411 ntBASIC10.71□□□□□ -0.69
Ybx1P62960 Gm8864-201ENSMUST00000118653 1010 ntBASIC10.71□□□□□ -0.69
Ybx1P62960 Gm12377-201ENSMUST00000118656 252 ntBASIC10.71□□□□□ -0.69
Ybx1P62960 Gm15554-201ENSMUST00000120406 913 ntBASIC10.71□□□□□ -0.69
Ybx1P62960 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC10.71□□□□□ -0.69
Ybx1P62960 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC10.71□□□□□ -0.69
Ybx1P62960 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.71□□□□□ -0.69
Ybx1P62960 Gm21963-201ENSMUST00000179519 330 ntBASIC10.71□□□□□ -0.69
Ybx1P62960 Gm17797-201ENSMUST00000182175 997 ntBASIC10.71□□□□□ -0.69
Ybx1P62960 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.71□□□□□ -0.69
Ybx1P62960 Gm38007-201ENSMUST00000192187 313 ntBASIC10.71□□□□□ -0.69
Ybx1P62960 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.71□□□□□ -0.69
Ybx1P62960 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.71□□□□□ -0.69
Ybx1P62960 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Mir341-201ENSMUST00000093593 96 ntBASIC10.71□□□□□ -0.69
Ybx1P62960 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ybx1P62960 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ybx1P62960 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Ybx1P62960 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Ybx1P62960 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Ybx1P62960 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ybx1P62960 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ybx1P62960 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ybx1P62960 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.71□□□□□ -0.7
Ybx1P62960 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ybx1P62960 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Ybx1P62960 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ybx1P62960 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 AC130671.3-201ENSMUST00000227393 1897 ntBASIC10.7□□□□□ -0.7
Ybx1P62960 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ybx1P62960 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Ybx1P62960 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms