Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Gm5278-201ENSMUST00000055957 552 ntBASIC12.14□□□□□ -0.47
Traf1P39428 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.14□□□□□ -0.47
Traf1P39428 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Traf1P39428 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Gm43625-201ENSMUST00000199177 1539 ntBASIC12.13□□□□□ -0.47
Traf1P39428 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.13□□□□□ -0.47
Traf1P39428 Gm12489-201ENSMUST00000119364 148 ntBASIC12.13□□□□□ -0.47
Traf1P39428 Gm11701-201ENSMUST00000121277 1142 ntBASIC12.13□□□□□ -0.47
Traf1P39428 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC12.13□□□□□ -0.47
Traf1P39428 Gm26943-201ENSMUST00000182295 957 ntBASIC12.13□□□□□ -0.47
Traf1P39428 Gm42779-201ENSMUST00000198807 406 ntBASIC12.13□□□□□ -0.47
Traf1P39428 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Traf1P39428 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Traf1P39428 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC12.13□□□□□ -0.47
Traf1P39428 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Traf1P39428 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Traf1P39428 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Traf1P39428 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Traf1P39428 Gm45161-201ENSMUST00000207316 2263 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 Gm23439-201ENSMUST00000104292 132 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Gm8482-201ENSMUST00000117972 471 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Gm13841-201ENSMUST00000118829 483 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Gm11449-201ENSMUST00000119175 476 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 Gm8210-201ENSMUST00000178557 483 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Gm15454-201ENSMUST00000179718 483 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Traf1P39428 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Gm8918-201ENSMUST00000190587 1087 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Gm7238-201ENSMUST00000206467 973 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC12.12□□□□□ -0.47
Traf1P39428 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 AC100406.1-201ENSMUST00000217305 480 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Gm14005-208ENSMUST00000223654 681 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Traf1P39428 Gm6344-201ENSMUST00000075962 483 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 Gm10238-201ENSMUST00000089689 408 ntBASIC12.12□□□□□ -0.47
Traf1P39428 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Traf1P39428 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC12.12□□□□□ -0.47
Traf1P39428 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Traf1P39428 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Traf1P39428 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms