Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Cilp-201ENSMUST00000048762 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Gm44189-201ENSMUST00000204387 3083 ntBASIC9.1□□□□□ -0.95
Cd28P31041 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC9.1□□□□□ -0.95
Cd28P31041 Cpm-201ENSMUST00000020399 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cd28P31041 Fes-208ENSMUST00000206728 2707 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Tbc1d14-203ENSMUST00000126077 4085 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
Cd28P31041 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cd28P31041 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC9.09□□□□□ -0.95
Cd28P31041 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Cd28P31041 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC9.09□□□□□ -0.95
Cd28P31041 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 R3hcc1l-201ENSMUST00000026188 4112 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 Kcnj5-202ENSMUST00000214223 3101 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Cd28P31041 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC9.09□□□□□ -0.95
Cd28P31041 Gm8216-201ENSMUST00000117232 601 ntBASIC9.09□□□□□ -0.95
Cd28P31041 Gm11380-201ENSMUST00000118067 560 ntBASIC9.09□□□□□ -0.95
Cd28P31041 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC9.09□□□□□ -0.95
Cd28P31041 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC9.09□□□□□ -0.95
Cd28P31041 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC9.09□□□□□ -0.95
Cd28P31041 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.09□□□□□ -0.95
Cd28P31041 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 Mir8091-201ENSMUST00000183602 139 ntBASIC9.09□□□□□ -0.95
Cd28P31041 Gm38313-201ENSMUST00000191953 1266 ntBASIC9.09□□□□□ -0.95
Cd28P31041 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC9.09□□□□□ -0.95
Cd28P31041 Gm9369-201ENSMUST00000196009 733 ntBASIC9.09□□□□□ -0.95
Cd28P31041 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC9.09□□□□□ -0.95
Cd28P31041 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.09□□□□□ -0.95
Cd28P31041 Gm7344-201ENSMUST00000212122 1222 ntBASIC9.09□□□□□ -0.95
Cd28P31041 Gm5189-201ENSMUST00000221796 261 ntBASIC9.09□□□□□ -0.95
Cd28P31041 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.09□□□□□ -0.95
Cd28P31041 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 Atg14-201ENSMUST00000042988 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 Slc5a1-201ENSMUST00000011178 4104 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cd28P31041 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.09□□□□□ -0.95
Cd28P31041 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 Gm37032-201ENSMUST00000194882 2975 ntBASIC9.09□□□□□ -0.95
Cd28P31041 Kcnh6-201ENSMUST00000001965 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd28P31041 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.96
Cd28P31041 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.96
Cd28P31041 Cald1-203ENSMUST00000115021 4041 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC9.08□□□□□ -0.96
Cd28P31041 Slco4c1-201ENSMUST00000071985 4908 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Vps8-202ENSMUST00000096192 4942 ntTSL 5 BASIC9.08□□□□□ -0.96
Cd28P31041 Gm6655-201ENSMUST00000201932 1309 ntBASIC9.08□□□□□ -0.96
Cd28P31041 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.08□□□□□ -0.96
Cd28P31041 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Tcn2-202ENSMUST00000109988 1957 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cd28P31041 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC9.08□□□□□ -0.96
Cd28P31041 Gm20658-202ENSMUST00000177059 1950 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Stk36-202ENSMUST00000087186 4065 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 CT572985.1-201ENSMUST00000220599 4714 ntBASIC9.08□□□□□ -0.96
Cd28P31041 Gm5697-201ENSMUST00000122295 2482 ntBASIC9.08□□□□□ -0.96
Cd28P31041 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC9.08□□□□□ -0.96
Cd28P31041 Uhrf1-204ENSMUST00000113039 3391 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Gria4-201ENSMUST00000027020 5441 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
Cd28P31041 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.08□□□□□ -0.96
Cd28P31041 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Cd28P31041 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Cd28P31041 Mir1938-201ENSMUST00000158746 100 ntBASIC9.08□□□□□ -0.96
Cd28P31041 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC9.08□□□□□ -0.96
Cd28P31041 Gm2383-201ENSMUST00000181461 807 ntBASIC9.08□□□□□ -0.96
Cd28P31041 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC9.08□□□□□ -0.96
Cd28P31041 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Mir194-2-201ENSMUST00000083648 86 ntBASIC9.08□□□□□ -0.96
Cd28P31041 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Kcne1-201ENSMUST00000051705 3155 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Aqp4-201ENSMUST00000079081 5082 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC9.08□□□□□ -0.96
Cd28P31041 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cd28P31041 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Cd28P31041 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cd28P31041 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Cpne5-201ENSMUST00000024805 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cd28P31041 Padi3-202ENSMUST00000172098 3310 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Gm26704-201ENSMUST00000181362 2901 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cd28P31041 Rab11fip3-201ENSMUST00000118828 3271 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Fhad1-203ENSMUST00000105780 4809 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Cd28P31041 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Gm45501-201ENSMUST00000211468 2526 ntBASIC9.07□□□□□ -0.96
Cd28P31041 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms