Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC154838.3-201ENSMUST00000228876 965 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm24035-201ENSMUST00000082867 107 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm23448-201ENSMUST00000083151 104 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Adgrv1-214ENSMUST00000224088 1492 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 AC154552.6-201ENSMUST00000221365 1342 ntBASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC8.55□□□□□ -1.04
Hoxd3P09027 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Tmod2-203ENSMUST00000164100 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm12389-201ENSMUST00000117696 418 ntBASIC8.55□□□□□ -1.04
Hoxd3P09027 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm12663-201ENSMUST00000118481 958 ntBASIC8.55□□□□□ -1.04
Hoxd3P09027 Selenot-ps-201ENSMUST00000119098 593 ntBASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm23218-201ENSMUST00000158124 276 ntBASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm25830-201ENSMUST00000158923 132 ntBASIC8.55□□□□□ -1.04
Hoxd3P09027 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm26914-201ENSMUST00000182262 223 ntBASIC8.55□□□□□ -1.04
Hoxd3P09027 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm37987-201ENSMUST00000194999 825 ntBASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm18894-201ENSMUST00000198794 694 ntBASIC8.55□□□□□ -1.04
Hoxd3P09027 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm7587-201ENSMUST00000207618 1021 ntBASIC8.55□□□□□ -1.04
Hoxd3P09027 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm8255-201ENSMUST00000218693 305 ntBASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC8.55□□□□□ -1.04
Hoxd3P09027 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hoxd3P09027 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms