Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm20392-201ENSMUST00000173047 701 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm25951-201ENSMUST00000175330 64 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm21943-201ENSMUST00000178181 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm37852-201ENSMUST00000193027 350 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm37560-201ENSMUST00000194289 1000 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm36997-201ENSMUST00000195090 707 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm42751-201ENSMUST00000198065 559 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 AL589696.1-201ENSMUST00000225711 330 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm43167-201ENSMUST00000202001 1606 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm12947-201ENSMUST00000116114 420 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm16518-201ENSMUST00000117960 508 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm14098-201ENSMUST00000119295 623 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm5257-201ENSMUST00000121823 790 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm24346-201ENSMUST00000158712 194 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm25677-201ENSMUST00000174983 72 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm23400-201ENSMUST00000174994 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm26463-201ENSMUST00000175065 101 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm24332-201ENSMUST00000175102 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm25959-201ENSMUST00000175112 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm22475-201ENSMUST00000175169 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm22903-201ENSMUST00000175193 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm25070-201ENSMUST00000175237 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm24159-201ENSMUST00000175264 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm25299-201ENSMUST00000175283 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm23798-201ENSMUST00000175560 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm23802-201ENSMUST00000175565 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm20689-201ENSMUST00000176033 279 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm25708-201ENSMUST00000177687 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm24370-201ENSMUST00000178007 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm23049-201ENSMUST00000178068 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm28019-201ENSMUST00000178138 101 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm25571-201ENSMUST00000178322 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm25355-201ENSMUST00000178456 101 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm24975-201ENSMUST00000178492 101 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm23189-201ENSMUST00000178954 102 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm25100-201ENSMUST00000179750 101 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm23064-201ENSMUST00000179866 101 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm43531-201ENSMUST00000200676 1114 ntBASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Otud1Q9CUB6 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms