Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm7103-201ENSMUST00000195642 1852 ntBASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 BC080696-201ENSMUST00000202858 1218 ntBASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smc1aQ9CU62 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm15136-201ENSMUST00000120552 533 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm11952-201ENSMUST00000121172 821 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Snord55-201ENSMUST00000174939 79 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm9625-201ENSMUST00000180422 955 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm38321-201ENSMUST00000195053 235 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm42751-201ENSMUST00000198065 559 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm45094-201ENSMUST00000207013 617 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm2448-201ENSMUST00000207080 559 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm5449-201ENSMUST00000081132 357 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm7589-201ENSMUST00000085631 534 ntBASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smc1aQ9CU62 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.71□□□□□ -0.53
Smc1aQ9CU62 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms