Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.31□□□□□ -0.92
Lysmd4Q8CC84 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lysmd4Q8CC84 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lysmd4Q8CC84 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lysmd4Q8CC84 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lysmd4Q8CC84 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lysmd4Q8CC84 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lysmd4Q8CC84 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Lysmd4Q8CC84 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lysmd4Q8CC84 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Lysmd4Q8CC84 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lysmd4Q8CC84 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lysmd4Q8CC84 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lysmd4Q8CC84 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Lysmd4Q8CC84 Zfp111-201ENSMUST00000056683 3380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Tbck-202ENSMUST00000169172 6578 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm45170-201ENSMUST00000206746 1671 ntBASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Lsm6-203ENSMUST00000130325 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Slc2a1-201ENSMUST00000030398 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Igf2bp2-202ENSMUST00000115379 3078 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm11246-201ENSMUST00000120880 345 ntBASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm26208-201ENSMUST00000158677 124 ntBASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm6069-201ENSMUST00000196501 463 ntBASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm39288-201ENSMUST00000210554 446 ntBASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm9619-201ENSMUST00000211587 762 ntBASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm4797-201ENSMUST00000219075 1283 ntBASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 BC106175-202ENSMUST00000219344 1213 ntBASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm18515-201ENSMUST00000219755 797 ntBASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Hdhd2-201ENSMUST00000026485 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm2897-201ENSMUST00000166494 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Gm3411-201ENSMUST00000170104 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Padi3-201ENSMUST00000026377 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lysmd4Q8CC84 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Zbtb37-205ENSMUST00000171748 2141 ntTSL 5 BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Rbm10-203ENSMUST00000084383 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Glp2r-201ENSMUST00000021289 1738 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Gm16071-201ENSMUST00000119589 793 ntBASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Gm12950-201ENSMUST00000121683 417 ntBASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Mir5120-201ENSMUST00000175020 78 ntBASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Gm18014-201ENSMUST00000183369 817 ntBASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Gm17826-201ENSMUST00000189720 798 ntBASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Gm37141-201ENSMUST00000191938 422 ntBASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 Gm18561-201ENSMUST00000206027 804 ntBASIC9.29□□□□□ -0.92
Lysmd4Q8CC84 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms