Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Calcoco2-201ENSMUST00000068686 1621 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Csl-201ENSMUST00000056085 1953 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Il1r2-201ENSMUST00000027243 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Pm20d1-201ENSMUST00000048660 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Gm24471-201ENSMUST00000104485 131 ntBASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Gm23822-201ENSMUST00000158739 128 ntBASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Rcvrn-201ENSMUST00000021290 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Olfr170-203ENSMUST00000218837 1008 ntAPPRIS P2 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 9330159N22Rik-201ENSMUST00000221530 1031 ntBASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Olfr170-201ENSMUST00000078603 1008 ntAPPRIS ALT1 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Gm32849-201ENSMUST00000208696 1798 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Snap25-201ENSMUST00000028727 2116 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Gm32914-201ENSMUST00000203815 2228 ntBASIC9.6□□□□□ -0.87
Spg11Q3UHA3 AC100729.1-201ENSMUST00000225458 1454 ntBASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 CT009713.3-201ENSMUST00000224987 1565 ntBASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Tefm-201ENSMUST00000050207 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Gm10113-201ENSMUST00000072437 3150 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Gm18829-201ENSMUST00000188150 1622 ntBASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 E330017L17Rik-202ENSMUST00000139190 861 ntTSL 5 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Gm7337-201ENSMUST00000180954 1125 ntBASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Gm37065-202ENSMUST00000192000 568 ntTSL 3 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 9230112J17Rik-202ENSMUST00000217430 764 ntTSL 3 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 AC160112.1-201ENSMUST00000219139 714 ntBASIC9.6□□□□□ -0.87
Spg11Q3UHA3 AC154283.2-201ENSMUST00000228954 614 ntBASIC9.6□□□□□ -0.87
Spg11Q3UHA3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Rpl19-ps11-201ENSMUST00000122422 591 ntBASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Tctex1d2-201ENSMUST00000014220 838 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 4933428C19Rik-201ENSMUST00000146043 818 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Atpaf1-202ENSMUST00000175725 996 ntTSL 5 BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Gm36973-201ENSMUST00000193942 259 ntBASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Gm44033-201ENSMUST00000203699 695 ntBASIC9.59□□□□□ -0.87
Spg11Q3UHA3 AC159244.2-201ENSMUST00000222051 220 ntTSL 3 BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Gzma-202ENSMUST00000224282 996 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 1700063H04Rik-201ENSMUST00000043553 817 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Gm6684-201ENSMUST00000053717 685 ntBASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms